Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3702 |
Symbol | |
ID | 6180900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 665152 |
End bp | 666363 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641683472 |
Product | hypothetical protein |
Protein accession | YP_001810385 |
Protein GI | 172062734 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.599062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCAC GACCGGATCC CGCCCAGGTG TCGGATGGCG TGCTGGCGCA TTGCCGCCGA CACGCGCATG CCGGCCACGA CCCGTTCGAC GGTTTGAACA GCCGCTTGTT CAGATGGACG GGGTTGTCGA AACTACCGTT TGCCAGCATT GCGTGGTTGC AAGTGCACAA GCGCAGCCCG CTCAATTTCA GGCAGATCCT CGGTGTTCCG CGCATGCGCA ATCCGAAGGG CGTCGCCCTC ATCGTGCTCG GCCTGCTCGA GCGCGAACAA CGGACCGGCG ACGGGGCGAA TCTCGACGAA GCGTGCGCAC TCGGCGACTG GCTGCTGGCG CACCGAGTGG ACCGCAAGCG CTGGCGCCAT AGCGCGTGGG GCTATCACTT CGACTGGGCG GCGAGGGCGT TCTTCGTGCC GGTCGGCACG CCGAACGCGA TCAGCACCTG CTATGTGGCG CGTGCGTTGT ACGCGCTCGG CATCGCCACC GGGGACGCGC GATTCACCGA TGTGGCGATC GATGCAGGCC ATTTTCTTGA TTCGCTTTAC CTGCCGCATC AAGGATCGGG TTATTTCGCC TACATCCCGG GTGAACCCGC CTTTGTTCAC AACGCGAATC TGTGGAGCGC GGCGTTCGTT GCCGAAACGG GTGCGCGCGT CAGGGACACG TCGATGCGTG AACGCGCGAT GTCGGCGGCG AGATTGACGG TCTCCATGCA GCGGGAGGAC GGCGCGTGGG CGTACGGGCT GCGCGATCAT CACGGGTTCG TCGATGGATT CCATACGGGA TATAACCTCG AAGCACTGCA GCGGCTTCAA CATACGTGCG GCACCCAGGT GTTCGCGAAA TCGATCGACC TCGGGCTCGC CTATTATCGC GACACGTTTT TTCTCTCCGA CGGCACCGTC AAGTACTACG ACGACACGAT TTGGCCGCTC GACATGCACT CTGTCGCACA GGCGCTGATC ACGTTGCTGA CCGTCTCGAC GTCGGAAGCG GATTATGCGT TGGCCGTGCG CGTATTCGAG CGCGCGGTCG AAACGCTCTA CATGCCGGCA AAGGGGCGCT TCGTCTACCA GCGCGGCGCA CGCTTCACGA ATCGGGTCGA CTATTTGCGG TGGACTCAAG CGTGGGCGTT CTACTCCATC GCGTTGCTCG CGAACCGAGC GCGTGCCGCC AATACCGCCG ACGCGCGTCT ACCTGAACGG GAAATCATAT GA
|
Protein sequence | MSARPDPAQV SDGVLAHCRR HAHAGHDPFD GLNSRLFRWT GLSKLPFASI AWLQVHKRSP LNFRQILGVP RMRNPKGVAL IVLGLLEREQ RTGDGANLDE ACALGDWLLA HRVDRKRWRH SAWGYHFDWA ARAFFVPVGT PNAISTCYVA RALYALGIAT GDARFTDVAI DAGHFLDSLY LPHQGSGYFA YIPGEPAFVH NANLWSAAFV AETGARVRDT SMRERAMSAA RLTVSMQRED GAWAYGLRDH HGFVDGFHTG YNLEALQRLQ HTCGTQVFAK SIDLGLAYYR DTFFLSDGTV KYYDDTIWPL DMHSVAQALI TLLTVSTSEA DYALAVRVFE RAVETLYMPA KGRFVYQRGA RFTNRVDYLR WTQAWAFYSI ALLANRARAA NTADARLPER EII
|
| |