| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3682 |
|---|
| Symbol | |
|---|
| ID | 6181072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 639340 |
|---|
| End bp | 640056 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641683452 |
|---|
| Product | CheW protein |
|---|
| Protein accession | YP_001810365 |
|---|
| Protein GI | 172062714 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.358535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCG ACGCCGTTGC CACTGACGAC ACGACGATCG GCGTCGACGA TTGCTGGAAC
CGGATCGGCA CGCGCGGCGA CCGCTCGTGC GAGCGGCTGG CCGACTGCCT GCGCTGCCTG
AACTGCCCGG TCTACGCGTA TCACGCGGCG AAACTGCTCG AACGCCCGCT CGGCGCGACC
GAGATGGCCG ACGCCACGCG GCGGATCAGC GCGCTCGACG CGACCGGCGC GCACGGCGGC
GACGATACGC GCCAGGCGGC GCTGGCGTTT CGCGTCGCCG ACGAATGGCT CGCGCTGCCG
ATCGGCGTGC TGCGCGAGAT CGCCGGCACG CGCCGGATCC ATTCGCTGCC GTATCGCCGC
CATTCGGCCG TGCGCGGCGT GGTCAACATT CGCGGCACGC TGCGCATCGC GATCTCGATC
GGCGCGCTGC TCGGCCTCGA GGCGGGCAAC GGCGGGAGCG GCGGCGGCAG CAGCGGCGGC
GACGGCCGCT TCACGCGACT GCTGGTCGCC GCGCACCAGG GCGAGCCGGT GGTGTTTCCG
GTCGACGAAG TCGAGGGCGT ACTGCGCTTC GGCGCATCCG AATGGGTGCC CGTGCCGGCG
ACGGTCGGGC GCGCGAGCGC CGGCCTGTCG CGCGGCGTGC TGTCGTGGCG CGGCAAGTCG
GTGGGCCTGC TCGACGACGA CCGGCTGTTC GACGCCGTCA CACGGAGCAT GCGATGA
|
|---|
| Protein sequence | MNRDAVATDD TTIGVDDCWN RIGTRGDRSC ERLADCLRCL NCPVYAYHAA KLLERPLGAT
EMADATRRIS ALDATGAHGG DDTRQAALAF RVADEWLALP IGVLREIAGT RRIHSLPYRR
HSAVRGVVNI RGTLRIAISI GALLGLEAGN GGSGGGSSGG DGRFTRLLVA AHQGEPVVFP
VDEVEGVLRF GASEWVPVPA TVGRASAGLS RGVLSWRGKS VGLLDDDRLF DAVTRSMR
|
|---|
| |