| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3649 |
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| Symbol | |
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| ID | 6180538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 596614 |
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| End bp | 597126 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641683419 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001810332 |
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| Protein GI | 172062681 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.629046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATAGCT TTCAGCGAGA GATCCCGAAG AGCCGGGTGT CGATCACGCT CGACCTGCAT
ACGGGTGGAG CGCAGAAGAA GGTCGAGTTG CCCTTGAAGC TGCTGGTCGC CGGCGACTTC
AGTGCCGGCC GTGAGCAGGC GCCGCTTGCC GAGCGCAAGA AGGTCAACAT CGACAAGAAC
AACTTCGACG CCGTGCTGGC CGACTATGCG CCGGATCTCA GGATCGCCGC GGACAACACG
CTGGCCGGCG ACGGTTCGGA GCTGCCCGTC AACCTGTCGT TCCGCTCGAT CAAGGATTTC
GCGCCCGAGC AGGTCGCGCG CCAGATTCCC GAGCTGCAGG CGCTCCTCGC GATGCGCAAC
CTGCTGCGCG ACCTGAAATC GAACCTGCTC GACAACGGCA CGTTCCGTCG CGAGTTCGAG
AAGGTGCTGA AGGACGATCG CCTGTCCGCG AAGCTGCGCG GCGAACTCGC GCAGATCGCG
ACCGCCGCGA CGCAGCCGGA AGGGCATGCG TGA
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| Protein sequence | MDSFQREIPK SRVSITLDLH TGGAQKKVEL PLKLLVAGDF SAGREQAPLA ERKKVNIDKN
NFDAVLADYA PDLRIAADNT LAGDGSELPV NLSFRSIKDF APEQVARQIP ELQALLAMRN
LLRDLKSNLL DNGTFRREFE KVLKDDRLSA KLRGELAQIA TAATQPEGHA
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