| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3646 |
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| Symbol | |
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| ID | 6181230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 592154 |
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| End bp | 593917 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683416 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001810329 |
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| Protein GI | 172062678 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCCCA CGGCGGCAAC CCGCGCCGAT TCCAATGCGG CACGCGCGGC GTTGTCGGGC
CTCGGCTATC CGCTCAGGAC GGTCGTGACG CTGTCCGCGG CACTGGCATT GGCCGTCGTC
GGATGGGTTG TACCCGTCGA GCGCGGCGTC ATGTGGGGAT GGGTAGCGCT CGTCGTCGCG
CTTTCCGCGC TGATCGTCTG GTTGCATTCG CGCGGATTGA CGCGCGCCCG CGAACAAAAC
GTTCAGGTGA TTGCGCAACT GGGCGCGGCG ACCGCCAACC TGCCCGTCAC GATGCGCACG
AGAATGCCGC TCGCGCTCGT CACGGGCGAC GGTCTGTCCG CGTTGTTCGA TCGCGATACG
GCCATGTCGC GTTTCGTACA TGTCGGCGAC GGCGCGATCT GGTTGCGAGC CGACCGCCCT
CAGGATCTTC CCCGGCTCGC CGTTGCGGTC CGCCAGTGGC GGGACGGTCA TGCGCCGGAT
TGTGTCGTGC TGGCGGTCGC GCCGGGCCTT CATGCGAACG ACGACACGCT GTCGCAGTCG
CTGCGCGTGA TCCGGCAAGC CGTGGCCGAT GCGTCCCGCA TGCTCGGCAC GTCGCTGCCG
GGCTATGTCG CTCTCTATCA GCGGCTCTCG AACGCAAATG CCGCGGCGAC GTTGCCCGCC
GTCGAATCGG CGGCCCGGTG GTATGGCATG TCGACCGGAT CGCCCATCGT CAACACGCAT
CGCTTCGACA CCGCGATCGA AGCAGCCGAG TCGGATGCGC TCCATGCCGA CGGCAGCCCC
GCGGTCGCGG CACGCGCCGC CGGCGTCGCA TCGATGATCG GATGGACCCG ACGCGTCGTG
TTCGACACGC TGACGGATCG ACGCCAGCCC GCATCGCCGT GGCCGTTGTT CGGCGTGGGC
TGGATCGACC ATGGCCCGGC GAGCGGCCCC GGCAAACCGT GGGAACGGGA AGTCCGCAGC
CTGACAGGTA TCGCCCCGGC CACACTGCCT GCGTCGCCGA CGCCGTGGCC ATTGCCGCAA
CCGCTGATCG ACGCGATGCC GCGCCGCACG TGGCGGTCGC CGCGCATCAC CGCCGCCGCG
CACGTCATCG CGATCGTCGC CTGCGCCGCA ATCGCCGCCA TCTGCGGCGC CGCAAAGAAC
AACGAGGCGT TGATGACCCG CATCGGCGAG CACCTCCAAC ACTACAACCG AATCCCCGCC
ACGCACGACA CGGCCAAACG CGACGCGCTC CGAGTCCTTG TGTCGGACCG CGATCAGCTC
GACCGGTACG CACGGGTCGG CGTGCCGCTC CGGCTGTCGT TCGGCACCTA TCGCGGCGCA
CCGCTGCTGC CCGTCATCAA CGACGCAATC GCGTCGTACG AACCGTCCCC GCCGCCGCCC
GCCGTCGTCA CGCTGGACAG CATGTCGCTG TTCGACAGCG GCAAGGCAAC GCTCCGAACG
GGCACCACGC GCGCGATGGT CGATGCGCTC GAACTGATCA AAGCCCATTC GGGCAAACGC
GTGCTCGTCG CTGGCTACGC GGACGATCAG GGTCGGCCCG ATCGCAATCT GAAGCTGTCG
ATCGATCGCG CGTCAGCCGT GCGCGACTGG CTCGTCGAAG CATCGGGCAT CCCGCCGACA
CGGTTCGCGA TCCAGGGCTA CGGCGATACG CGGCCGGTCG CGGACAACGC CACGCCGGAA
GGGCGGGCGA AGAATCGTCG GGTCGAGATC ACGCTCGTGC CCGATACACC GGTGCCTGCC
GTCCCGACCG GCGCCGCGAG GTAA
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| Protein sequence | MLPTAATRAD SNAARAALSG LGYPLRTVVT LSAALALAVV GWVVPVERGV MWGWVALVVA
LSALIVWLHS RGLTRAREQN VQVIAQLGAA TANLPVTMRT RMPLALVTGD GLSALFDRDT
AMSRFVHVGD GAIWLRADRP QDLPRLAVAV RQWRDGHAPD CVVLAVAPGL HANDDTLSQS
LRVIRQAVAD ASRMLGTSLP GYVALYQRLS NANAAATLPA VESAARWYGM STGSPIVNTH
RFDTAIEAAE SDALHADGSP AVAARAAGVA SMIGWTRRVV FDTLTDRRQP ASPWPLFGVG
WIDHGPASGP GKPWEREVRS LTGIAPATLP ASPTPWPLPQ PLIDAMPRRT WRSPRITAAA
HVIAIVACAA IAAICGAAKN NEALMTRIGE HLQHYNRIPA THDTAKRDAL RVLVSDRDQL
DRYARVGVPL RLSFGTYRGA PLLPVINDAI ASYEPSPPPP AVVTLDSMSL FDSGKATLRT
GTTRAMVDAL ELIKAHSGKR VLVAGYADDQ GRPDRNLKLS IDRASAVRDW LVEASGIPPT
RFAIQGYGDT RPVADNATPE GRAKNRRVEI TLVPDTPVPA VPTGAAR
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