| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3643 |
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| Symbol | |
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| ID | 6180040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 588351 |
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| End bp | 588773 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683413 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001810326 |
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| Protein GI | 172062675 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.792482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.717255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCCG GCCCCTCCCT CTACGACATG CTGCTCGGCC AGATCGGCGG CGAGCCGATC
GGCGCCTACG ACGACCGGAC GCTCGAATGC CTGAGCGTGC AGCAGAACGT GCGCCGCATT
CTCAATACGC GGGCGGGCGC GCTCAAGCAC CTGCCCGACT ACGGGTTGCC CGACCTCACG
AACATCTACA AGGCGCTACC CGCGTCGGCG CATCTGCTCA AGCAGCAGAT GGAAGCCACG
CTACTGAAGT ACGAGCCGCG CATCCGTTCG ATCGACGTCG CGATCGTCGA GAACCGCGAT
CCCGGCATCC TGGTCAGCTT CGAAATGACC TGCCACCTGA AGAACACGCG GCTCGTGCGC
TTCGGCACCT ACTTCGAACC GCCGGGCCGC CTGCGCATCG AACGGCGCCT CGACCGGACG
TGA
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| Protein sequence | MTAGPSLYDM LLGQIGGEPI GAYDDRTLEC LSVQQNVRRI LNTRAGALKH LPDYGLPDLT
NIYKALPASA HLLKQQMEAT LLKYEPRIRS IDVAIVENRD PGILVSFEMT CHLKNTRLVR
FGTYFEPPGR LRIERRLDRT
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