| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3630 |
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| Symbol | |
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| ID | 6179237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 574680 |
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| End bp | 576122 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683400 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001810313 |
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| Protein GI | 172062662 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.844951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TACTCGTCGC GCTGGCCGTC AGCGCGCTCG CCGCCGGCTG CGCGGTGCAG
CCCGCACAGC ACCCCGCGCT GCACGATTCC GTTCAATCGC TCGCGCCCGC CGCGTGGGAC
ACCGACGTGC CGCGCGCGGA CATCGACGCC GCCGCGTGGT GGGCGCGCTT CCACGATCCC
GTGCTCGACC GGCTGATCGC GACCGTGCTC GACGGCAACC TCGATCTGCA AGCCGCCACC
GAGCGCGTGA AGCAGGCGCA GGCGCTGACC GTGCAGAAGC GCGCGGCGCT GCTGCCCGAA
CTCGACGCGA CCGCGCGTGC GTCCGACGCG CGCCAGAACA CGCCGCCGCC GCTCGGCTAC
GTGCGGCAGG CCGGCATCGG GCTCGCGCTG AGCTGGTCGC CGGACGTGTT CGGCGGCGAA
CGGCTCGACC TGCTCGCGGC GCAAGCCGGG CTGGTCGGAC AACAGCATGC GGAAGATGCA
ATGCGGCTCG CGCTTGCGGC CGATGCGGCG TCCGCGTACA TCGACCTGCG CTGGGCGCAG
CAGGAACTGA AGATCCTGCA GGACAACGCG GCGATCCGTC AGCATGCGCT CGAGCTCACG
CGCAAGCGCC AGGCGTTCGG GCTGTCCACG GAACTCGACG TCACGCGCGC GCAGAACCAG
CTCGATGCGC TCGAGGCGCG GATTCCGCCG ACGCAGGCGC AGATCGCGCA TCAGCTCAAC
CTGATCGCCG TGTATTCGGG CCGCACGCCC GAGTCGGTCG ACCGGCTCGT GCTCGCGCAG
GCCGGCGCGA TTCCCGCACC GCCGGCCGGG TCGCCCGCCA CGCTGCCGTC GCAGGCGCTG
CTGCGACGGC CCGACGTGCT CACCGCTTAC GCGCAGGTCG AACGGCGCGC GGCGCAGGTC
GGTGTCGCGA AGGCCGAGCG GTATCCGAAG TTCTCGCTGA ACCTGGCGGA CGGGATTCTT
GCCGCGTCGT ACCTCGGCTT GCCGACGCTG ACCGACAACC TGTTCAGCGC GGCGCTGAGC
GCGACCAGCC CGATCTTCAA CGCTGGGCGG ATCACGGCCG ACATCACGCA GAGCGAAAGC
CGGATGCGCG AGTCGGAACT CGGTTTGCGG CAGACGATGC TGCAGGCGCT GCGGGAAGTG
GAGGATGCGC GCGCAAACCT CGTCAGCAGC GATGAAGCGA CACGGCGGCT CGATAGCGCG
CTCGCGGCGT CGGACAAGGC GCTCGGGCTG GCGAATCAGC TCTACAAGGG CGGCGCGACG
GATTTTCTGG ACGTGCTGTC CGCGCAGGAG GTCTATCTGC GGGACTCGGA TGCGCTCAAT
CAGGTGAGGC GCGAGCATGC GCTGGCCGCG GTCGCGTTGT ATCGGTCGCT TGGCGGCGGG
TGGAGCAGGA ACGATGCGGC GGGCGGGACG GACACGCAAG CGGTCGCGGC CGCGACGGAC
TGA
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| Protein sequence | MKKLLVALAV SALAAGCAVQ PAQHPALHDS VQSLAPAAWD TDVPRADIDA AAWWARFHDP
VLDRLIATVL DGNLDLQAAT ERVKQAQALT VQKRAALLPE LDATARASDA RQNTPPPLGY
VRQAGIGLAL SWSPDVFGGE RLDLLAAQAG LVGQQHAEDA MRLALAADAA SAYIDLRWAQ
QELKILQDNA AIRQHALELT RKRQAFGLST ELDVTRAQNQ LDALEARIPP TQAQIAHQLN
LIAVYSGRTP ESVDRLVLAQ AGAIPAPPAG SPATLPSQAL LRRPDVLTAY AQVERRAAQV
GVAKAERYPK FSLNLADGIL AASYLGLPTL TDNLFSAALS ATSPIFNAGR ITADITQSES
RMRESELGLR QTMLQALREV EDARANLVSS DEATRRLDSA LAASDKALGL ANQLYKGGAT
DFLDVLSAQE VYLRDSDALN QVRREHALAA VALYRSLGGG WSRNDAAGGT DTQAVAAATD
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