| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3592 |
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| Symbol | |
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| ID | 6179331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 529542 |
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| End bp | 530462 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683362 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001810275 |
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| Protein GI | 172062624 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.503754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCG TCATGGCGGA TACCGTCCAG CCGGCCGATC TCGGTTTCTT CTCGACGCTG
GCCGCGTCGG GCAGCCTGAG CGCGGCCGCG CGCGAACTCG GGCTGACCGC GGCGGCCGTC
AGCAAGCGGC TCACCCAGAT GGAGCGCCGC GCCGGTGTGA CGCTCGTCAA CCGCACGACA
CGGCGCATGA TGCTCACGCC CGAGGGCGAC GTGTATCTCG ACTACGCACG CCGGATCCTC
GATCAGATGG ACGAACTGGG TGAATTGCTC GGCAGCGCTA AACAGCGGCC GAAGGGGCTG
CTGCGCGTAA ATGCGACGCT CGGCTTCGGG CGCAGCCACG TCGGCCCGGC GATCTCGCGC
TTCGTCGCGC GCTATCCGGA AGTGTCGGTG CAGCTACAGC TGTCGGTGAT GCCGCCGCCG
CTGACGGACG ACGCGTTCGA CGTGTGCATC CGCTTCGGCG AGCCGCCCGA CACGCGCGTC
GTCGCGCGGC GGCTCGCGCC GAACCGCCGG CTGCTGTGCG CGGCGCCCGC GTATCTCGCT
CGGCACGGGA CACCGGGCAC GCCGCACGAG CTGACGCGAC ACAACTGCAT CGGCATCCGG
CAAGGCGATG AAGGCTACGG GATCTGGCGG CTGACGGGCG GACGCGGCGC GTCGCGCAAC
ACGGAGGCCG TGCGGATCAA TGGCAACCTG ACGACGAACG ACGGCGAGAT CGCGGTGAAG
TGGGCGCTCG ATGGACACGG GATCCTGATG CGCGCGGAAT GGGATATCCG CGACTACCTG
GCCGACGGGC GCCTCGTCGT CGTGCTGCCG GACTACGAGA CGCCGGCCGC AGATATTTAC
GCGGTGTATG CGCAACGGCA TCAAATGTCC GCGCGGATCC GCGCGTTCGT GGACTATGTG
GCGGGGGAGC GGGGTGGGTG A
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| Protein sequence | MNPVMADTVQ PADLGFFSTL AASGSLSAAA RELGLTAAAV SKRLTQMERR AGVTLVNRTT
RRMMLTPEGD VYLDYARRIL DQMDELGELL GSAKQRPKGL LRVNATLGFG RSHVGPAISR
FVARYPEVSV QLQLSVMPPP LTDDAFDVCI RFGEPPDTRV VARRLAPNRR LLCAAPAYLA
RHGTPGTPHE LTRHNCIGIR QGDEGYGIWR LTGGRGASRN TEAVRINGNL TTNDGEIAVK
WALDGHGILM RAEWDIRDYL ADGRLVVVLP DYETPAADIY AVYAQRHQMS ARIRAFVDYV
AGERGG
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