| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3590 |
|---|
| Symbol | |
|---|
| ID | 6179329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 528052 |
|---|
| End bp | 528813 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641683360 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001810273 |
|---|
| Protein GI | 172062622 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.698799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCG GCGCCGCGCC TGCCGGCGAA CGCGTCTATA CCGACCCGCG CCTCGTCGCG
GTCTACGACC GGTTCAACGC CGGTGATCGC GACTTCACGT TCTACGCATC GCGCATCGGC
GCCGCGCGGC AACGGATCCT CGATCTCGGC TGCGGCACCG GCACGTTCGC GCGGCGGCTT
GCGTCGGCCG GACACGACGT CGTCGCGATC GATCCCGCGC CCGCGATGAT CGACCATGCG
CGACGCCAGC CGGGCGCCGA CGCCGTGCAC TGGTTCGCGT GCGGCCTCGA CGGCCTGCCG
CCCGGCGCGC CATTCGACGC CGTCGTGATG ACCGGGCACG CGTTCCAGTG CCTGCTGACC
GACGCGGAGA TCGACGCGAC GCTGCGCGGC GTGCGGCGCG TGCTGGCCAA CGGTGGCCGC
TTCCTGTTCG AAACCCGCAA CCCGCGTGTC GAGCCGTGGC GGGCGTGGAC ACCACAGGCG
TCCGTATCCC GGATCGATTC GCCGGAATTC GGCATCGTCG AGCTGCACCA CGCGGTGACC
GCCGTCGACG GGCCAATCGT GTCGTTCGAC ACGGTCTACC GCTTTCACCG TGACGATACG
CAGGTGAAGA GCGCGAGCCG GCTGCGCTTC ATCGCGCAAA GCGAACTGCA GGCGCGGGTC
GCGGCCGCCG GTTTCTCGTC GGCCGACTGG TGCGGCGACT GGCACGGCGC GCCGTTCGAT
GATGCAGTCA GTGCGGAGAT CATCGCGATC TGCCGCGTGT GA
|
|---|
| Protein sequence | MTSGAAPAGE RVYTDPRLVA VYDRFNAGDR DFTFYASRIG AARQRILDLG CGTGTFARRL
ASAGHDVVAI DPAPAMIDHA RRQPGADAVH WFACGLDGLP PGAPFDAVVM TGHAFQCLLT
DAEIDATLRG VRRVLANGGR FLFETRNPRV EPWRAWTPQA SVSRIDSPEF GIVELHHAVT
AVDGPIVSFD TVYRFHRDDT QVKSASRLRF IAQSELQARV AAAGFSSADW CGDWHGAPFD
DAVSAEIIAI CRV
|
|---|
| |