| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3565 |
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| Symbol | |
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| ID | 6180174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 499965 |
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| End bp | 501254 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641683334 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_001810248 |
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| Protein GI | 172062597 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.274791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0384386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCACGA CGGTCGCGAA CGGCGGTAGC CAGATCGGCG GCGTGCAGGT CCCCGGCACG
AGCCCGACGA CGGCCACCAG CATCGGCAAC GCCGTCACGA GCCTCGGCAT CGGCGTGCAG
TCGCTCGGCA GCGGCGTCGC GGCCGGCCTC GGGTCGATCG GCGTGTCGCC GAACCCGCTC
GGCCCGACGC TCACGTCGAC CACCGGCCTG CTGACGGGCG CCGGCGGCGC GGTCAACAAC
CTCGGCAACG CGGTGACGAG CCTCGGCAGC GGCCCGCTGT CGCCGCTCGC GCCGGCCACG
ACCCTGGTCG GCGATCTGGT CAACACGGTC GGCACCGCGG TCAACTCGAC CGCATCGGCG
CTGAACACGG CGCTGAACAG CGCGCCGGTC CAGCAACTCG AGACGCAGCT CGGCAGCGTG
ATCAACCCGA TCACGAACAC GCTGACCGGC GGCGCCACGA CGCCGGGCGC CACGCAGACG
CTCGGCAACG CAACCCTCCT CGGCGCCCCG CTCAGCGGCC TGCTGAGCAC GCTCGGCAGC
GGCCTCGGCC TCGCCGGCTC GCAGGTCGGC AGCGCGACCG GCAACCCGGT CGGCACGAGC
GCCGGCGGCA GCGTGTCCCA GCTCGGCAAC ACGGTGGCGT CGGCCGGCGG CCTGCTGTCA
AGCGGCAGCT CCAGCAGCGG CACCAACCCG CTCGCACCGA TCACCGGTCT GCTCGGTACG
CTGACGGGTG GCCTCGGCGG CGGCAGCAGC TCGAGCGGGT CGGGCGGCAC CAGCGGAACG
AGCGGCACGA GTGGTACCAG CGGCGGCCCG CTCGCACCGA TCACCGGCCT GCTCGGCACG
GTGACGGGTG CGCTCGGCGG CCTCGGTTCG AGCGGAACGA GCGGAACGAG CGGAACGAGT
GGCACCGGCG GCACCAGCGG CTCGGGTGTC GGAGGTCTGC TTGCGCCGGT CACCGGCCTC
GTCAACTCGC TGACCCCGCT CGGCGCCAGC CTGACCGGCA CGGTCACGAC GCCGGGCGGC
GGCCTGACGG GCACCCTCGG CGGTGCGCTG ACGAGCGGCC CCGTCGGCAC GCTGACGGGT
TCGCTCACGT CGCCGGCCGG CGCGTTGGGC GCGCTCGGCA CGGCCAGCCC GAGCGGCGCG
GCCGGCACGG TGACGACGCC GTCCGGCAGC AGCGTCGTCA CGACCGGCCT GACCGGCAGC
TCGACCGGTG CCGCGGGCGG CACGAACAAC CTGCTCGCGC CGGTGACGAA CCTGCTCGGC
GGCCTGCTCG GCGCCACCCC GAAGAAGTAA
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| Protein sequence | MGTTVANGGS QIGGVQVPGT SPTTATSIGN AVTSLGIGVQ SLGSGVAAGL GSIGVSPNPL
GPTLTSTTGL LTGAGGAVNN LGNAVTSLGS GPLSPLAPAT TLVGDLVNTV GTAVNSTASA
LNTALNSAPV QQLETQLGSV INPITNTLTG GATTPGATQT LGNATLLGAP LSGLLSTLGS
GLGLAGSQVG SATGNPVGTS AGGSVSQLGN TVASAGGLLS SGSSSSGTNP LAPITGLLGT
LTGGLGGGSS SSGSGGTSGT SGTSGTSGGP LAPITGLLGT VTGALGGLGS SGTSGTSGTS
GTGGTSGSGV GGLLAPVTGL VNSLTPLGAS LTGTVTTPGG GLTGTLGGAL TSGPVGTLTG
SLTSPAGALG ALGTASPSGA AGTVTTPSGS SVVTTGLTGS STGAAGGTNN LLAPVTNLLG
GLLGATPKK
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