Gene BamMC406_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3564 
Symbol 
ID6179643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp498561 
End bp499844 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content67% 
IMG OID641683333 
Producthypothetical protein 
Protein accessionYP_001810247 
Protein GI172062596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0365103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.100331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA CCATCGACGG CATCGCCGCC GTCCAGGACC GCCCGCCCCG TTCCGCCACG 
CCATTGCGCG CCGGCCTGCT CGGCATCGCG GCCGGCCTGT TCGCGGTGTG GATCACCCGC
GACCAGCCGA TCCTCGATGC GGCCACGCGC GCGGTCATCG CCAGCCTCGC GATCATCGGC
ACGATCGCGC TGCACGAAAT CTTCATCTCG CGCGTCTACC TGCGCCCGAG CGCGGGACTG
TCGCGGCAGG CCGTGCGCAC GCTCGGGCTC GCCCGCGTCG CGACGCGTCT CGGCGCGCTG
ACGTCGATCT ACGCCGGCAT CGGCCTGCTC TACTGGCTGC TGCCCGAATA TCACGGCGCG
TTCTACCTGC CGTTCTGGTC GCTGCTGCGC TCGCTCGCGC CGTACGTGAT CGTCGCCGCG
CCGTTCTACT TCGCGTGGAT GGATCGCCAC CAGCGCGAGA CCGACGACGC GTACCTGCTG
TGGGGCCGCT TCCTGTTCCG CCGCGAGCAG CCCGCGAGCT GGCAGCCCGT GCGCGAGATG
CTCGCCGGCT GGGGCGTGAA GGCGTTCTTC CTGCCGCTGA TGACCGTGTA CCTGTCGAAG
GACGCCGATC ACCTGAGCGC GTCGCTCGCG AACGCGCTGC ACGCGCCGAT GACGCTCGCG
ACCTTCGTGT TCCTGTACGA CCTGTCGTTC ACGATGGACC TGATGTTCGG CACCGTCGGC
TACCTGTGCA CGTTCCGCAT CCTCGACAGC CACGTGCGCA CCGTCGAGCC CACCACGCTC
GGCTGGGTCG CCGCGCTGAT GTGCTACCAG CCGTTCTGGT CGCTGATCTC GAACAACTAC
ATCCGCTACG AAGGCTCGCT GTTCTGGGAC AACTGGCTGT TGTCCGCGCC GACGCTGCGC
GTGATCTGGG GCGCGGTGAT CATCCTGCTG CTGATGACCT ACGCGCTGTC GACGATCTCG
TTCGGGCTGC GTTTCTCGAA CCTAACGAAC CGCGGGATCA TCACGTCGGG CCCGTACCGC
TTCACGAAGC ATCCGGCGTA CATCGCGAAG AACCTGTCGT ACTGGATGGT GTCGGTGCCG
TTCGTCGAGC CGCTCGGCTG GCAGCTCGGG CTCATGCACT GCGCGGGGCT CGTCGCGGTC
AACCTGATCT ACTACACGCG GGCGAAGACG GAAGAACGGC ATTTGATGCG GGATCCCGAC
TATCGCGCGT ATGCGGAGTG GATCGCGCGG CACGGGCTGT TCGCGCGAAT CAGGCGGGCG
TTTGGGGGTC GGCAGGCGGT GTGA
 
Protein sequence
MNSTIDGIAA VQDRPPRSAT PLRAGLLGIA AGLFAVWITR DQPILDAATR AVIASLAIIG 
TIALHEIFIS RVYLRPSAGL SRQAVRTLGL ARVATRLGAL TSIYAGIGLL YWLLPEYHGA
FYLPFWSLLR SLAPYVIVAA PFYFAWMDRH QRETDDAYLL WGRFLFRREQ PASWQPVREM
LAGWGVKAFF LPLMTVYLSK DADHLSASLA NALHAPMTLA TFVFLYDLSF TMDLMFGTVG
YLCTFRILDS HVRTVEPTTL GWVAALMCYQ PFWSLISNNY IRYEGSLFWD NWLLSAPTLR
VIWGAVIILL LMTYALSTIS FGLRFSNLTN RGIITSGPYR FTKHPAYIAK NLSYWMVSVP
FVEPLGWQLG LMHCAGLVAV NLIYYTRAKT EERHLMRDPD YRAYAEWIAR HGLFARIRRA
FGGRQAV