| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3530 |
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| Symbol | |
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| ID | 6179119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 459952 |
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| End bp | 460989 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683299 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001810213 |
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| Protein GI | 172062562 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.243257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACT CCGCCACCAG CCGGCCGCCG GCCCCGGCCC GCGCCGAAGC TTCACCGCAC
GACGGCGAGT CGCCCGACGG CCTGCGCGTG CAGGATCTCG ATCTCAACTT GCTGAAGACG
TTTCGCGCGG TGTACGAGGA GCGGCACGTC GGCCGCGCGG CGCTGCGGCT CGGCGTCACG
CAGCCGTCGG TCAGCTACGC GCTCAGCCGC CTGCGGCTGA TGTTCCGCGA CGCGCTGTTC
GTGCGCACCG GCACCGGCGT CGAGCCGACG CCGCGCGCGC AGCGGCTCGC GATCTCGGTC
GACAAGGCGC TCGCGATCCT GCAGGACGTG CTCGACGAAG GCTCACGGTT CACGCCGGAC
AGCACGCAGC GCGTGTTCCG GCTGCACATG AGCGATTTCG CGGCGAGCGC CTTCCTGCCG
ACGCTGCTCG CGGCATTCGA CCGGCGCGCA CCGGGCGCGG TGATCGAGAC GCTGCACGTC
GACGAATGCC AGCTCAACGT CGCGCTCGAA TCGGGCCGCA TCGATTTCGC GCTCGGACAT
TTCGCGGATG CATCGAGCCA TTTCCAGCGC GCGGCGCTGC TGCACGAGCG CTGCGTGTTG
CTGATGCCGC GTCGCACCGC GCAACGCGTC GCACTGCCCG ACGATTTCGT GCTCGACGGC
GACGCGCCGG ACACGCTGCG CTTCGTCGCG GTGACATCGC ATCCGCAGTC GATGCAATTG
CTCGAGCGGC ACGGACTGAT GCCGCGCGTA CGGGCCGCGC TGCCCGACTT CATGGTGGTG
CCGGCGCTGC TCGAACACGG CGATTACGCG CTGATCCTGC CGGAGACCGT CGCGATCACG
TTCGCCGCGC GTCAGCCGTG CACGCTGTAC GAGATCGCGG GGGCTGGCGA ATGGGCCGTC
AACGCGTACT GGCACCGGCG CTTCGACGCG GACCCGGGCC ATCGCTGGCT GCGTGCGCTG
CTGCTGGAGT TGTTCGATAT CGGCCGGCAG CCGCCGTTCG ACGCATGGCT CGCACCGCAC
CCGCCCGCCT GCGCGTAG
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| Protein sequence | MTHSATSRPP APARAEASPH DGESPDGLRV QDLDLNLLKT FRAVYEERHV GRAALRLGVT
QPSVSYALSR LRLMFRDALF VRTGTGVEPT PRAQRLAISV DKALAILQDV LDEGSRFTPD
STQRVFRLHM SDFAASAFLP TLLAAFDRRA PGAVIETLHV DECQLNVALE SGRIDFALGH
FADASSHFQR AALLHERCVL LMPRRTAQRV ALPDDFVLDG DAPDTLRFVA VTSHPQSMQL
LERHGLMPRV RAALPDFMVV PALLEHGDYA LILPETVAIT FAARQPCTLY EIAGAGEWAV
NAYWHRRFDA DPGHRWLRAL LLELFDIGRQ PPFDAWLAPH PPACA
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