Gene BamMC406_3475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3475 
Symbol 
ID6179350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp397308 
End bp397901 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID641683244 
ProductTetR family transcriptional regulator 
Protein accessionYP_001810158 
Protein GI172062507 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.213074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG AAACACACAC GAAGGGGAGC GCGCCCGATA CGCGCGAGCG CATTCTGCAA 
ACGGCGAGCG CGCTGTTCTA TCGGGAAGGG ACGCGGGCGG TCGGCGTGGA TTTGATCGTC
GCGCAGGCGG GCGTCGCGAA GACGAGCCTG TATCGGCACT TCGCGACGAA GGACGACCTG
ATCGAGGCGT TTCTGCTGCG CGAGGATGCG GATTTCTGGG CGCACTGGGA CGCGGTGGCC
GCGCGGTACC GGCGCACGCC GCGCGAGGAG CTGGACGCGC AGCTGCAGTG GATCGGCGAG
CGCATCGAGC GGCCCGGTTA TCGCGGCTGT CCGCAGATCA ACATCGCCGC GGAGTATGCG
GACGCCAATC ATCCGGCCCG CAAGGTCGCC GTCGCGCACA AGCAGGAATT GCGGCGCCGG
CTGACGGAAC TGGCGAGCGC GATAGGGATC GACGAACCGC AGACTTACGC GCTGCGGCTC
GCGACCGTCA TCGACGGCGC GCTCAGCAGC GGGTACGCGC TGCACGCGCA CGGCCCCGTG
CGCTTCCTGC AGGAGTTCGC GCAACTGCTG ATGCCGGCGA AGGGCAGGAA ATGA
 
Protein sequence
MKQETHTKGS APDTRERILQ TASALFYREG TRAVGVDLIV AQAGVAKTSL YRHFATKDDL 
IEAFLLREDA DFWAHWDAVA ARYRRTPREE LDAQLQWIGE RIERPGYRGC PQINIAAEYA
DANHPARKVA VAHKQELRRR LTELASAIGI DEPQTYALRL ATVIDGALSS GYALHAHGPV
RFLQEFAQLL MPAKGRK