Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3475 |
Symbol | |
ID | 6179350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 397308 |
End bp | 397901 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683244 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001810158 |
Protein GI | 172062507 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.213074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGG AAACACACAC GAAGGGGAGC GCGCCCGATA CGCGCGAGCG CATTCTGCAA ACGGCGAGCG CGCTGTTCTA TCGGGAAGGG ACGCGGGCGG TCGGCGTGGA TTTGATCGTC GCGCAGGCGG GCGTCGCGAA GACGAGCCTG TATCGGCACT TCGCGACGAA GGACGACCTG ATCGAGGCGT TTCTGCTGCG CGAGGATGCG GATTTCTGGG CGCACTGGGA CGCGGTGGCC GCGCGGTACC GGCGCACGCC GCGCGAGGAG CTGGACGCGC AGCTGCAGTG GATCGGCGAG CGCATCGAGC GGCCCGGTTA TCGCGGCTGT CCGCAGATCA ACATCGCCGC GGAGTATGCG GACGCCAATC ATCCGGCCCG CAAGGTCGCC GTCGCGCACA AGCAGGAATT GCGGCGCCGG CTGACGGAAC TGGCGAGCGC GATAGGGATC GACGAACCGC AGACTTACGC GCTGCGGCTC GCGACCGTCA TCGACGGCGC GCTCAGCAGC GGGTACGCGC TGCACGCGCA CGGCCCCGTG CGCTTCCTGC AGGAGTTCGC GCAACTGCTG ATGCCGGCGA AGGGCAGGAA ATGA
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Protein sequence | MKQETHTKGS APDTRERILQ TASALFYREG TRAVGVDLIV AQAGVAKTSL YRHFATKDDL IEAFLLREDA DFWAHWDAVA ARYRRTPREE LDAQLQWIGE RIERPGYRGC PQINIAAEYA DANHPARKVA VAHKQELRRR LTELASAIGI DEPQTYALRL ATVIDGALSS GYALHAHGPV RFLQEFAQLL MPAKGRK
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