Gene BamMC406_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3443 
Symbol 
ID6181164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp362883 
End bp364160 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content67% 
IMG OID641683212 
Productepocide hydrolase domain-containing protein 
Protein accessionYP_001810126 
Protein GI172062475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCA CACCGTTTTC CCCGATGCGT CGGCACCTGC TGGCCACGTC CGTGGCCGCG 
GGTGTATCCG CGATGCTGCC CACCGCGCTG CATGCGGCAA CCGGCGACAC CGGCATACGC
CCGTTCACCG CCCATATCCC CGATGACGCA CTGGTCGACC TGCGCCGCCG CATCACCGCG
ACACGCTGGC CGGGCCGCGA GACCGTCGCC GACGAATCGC AGGGCGTGCG GCTCGCACGC
ATGCAGGCGC TGCTGCGCTA CTGGGGCACC GACTACGACT GGCGCAAGGG CGAGGCGCGC
CTGAACGGCT TCCCGATGTT CATCACGGAA ATCGACGGGC TCGACATTCA CTTCATCCAC
GTGCGGTCGC GGCACGCGAA TGCGATGCCG ATGATCATGA CGCACGGTTG GCCGGGTTCG
GTCTTCGAGC TGGTGAAGGC GAGCGGCCCG CTGACCGACC CGACCGCGCA CGGCGCGAGC
GCCGACGATG CATTCCACGT CGTCGTGCCG TCGCTGCCGG GCTTCGGCTT CTCGGGCCGT
CCGACGAAGA CGGGCTGGGG CTCGGACCAC ATCGCGCGCG CATGGGGCGA GCTGATGGCG
CGCCTCGGCT ATACGCGCTT CGTGTCGCAA GGCGGCGACT GCGGCTCGGT GATCTCGCAC
CGGATGGCGA TGCAACGCGT GCAGGGCCTG GCCGGGATTC ACGTGAACAT GCCGGCGACG
GTGCCGCCGG ACATCGCGAC GCTGCTCCAG GTCGACGCGC CGGCTCCCGC ATCGCTGTCG
CCGAAGGAGA AGGCCGCGTA CGAGAAGCTC GCGACGTTCT ATCGCGACAA CTGCGGCTAC
TCGGCGATGA TGGTCACGCG TCCGCAGACG GTCGGCTACG CGCTCGCCGA TTCGCCGTCG
GGGCAGGCTG CGTGGATGTA CGACAAGATC TCGCAGTGGA CATACAGCGG CGGCGTACCC
GAACGTTCGA TTCCGCGTGA CGAGATTCTC GACGACATTT CGTTGTACTG GCTGACCAAC
ACGGCGACGT CCTCCGCGCA GATCTACTGG GAGGATCACT CGAACAACTT CAACGCGGTG
GACATCTCGC TGCCGGCCGC GATCACGGTG TTCCCCGGCG AGATCTATCA GGCGCCGCGC
AGTTGGGCCG AGCGCAGCTA TCACAACCTG ATCTACTTCA ACGAAGTCGA CAAGGGCGGC
CATTTCGCGG CATGGGAAGA GCCGGAGCTG TTCGCACGCG AAGTGCGTGC CGGGTTCCGG
CCGTTGCGTC GCGCGTAA
 
Protein sequence
MSSTPFSPMR RHLLATSVAA GVSAMLPTAL HAATGDTGIR PFTAHIPDDA LVDLRRRITA 
TRWPGRETVA DESQGVRLAR MQALLRYWGT DYDWRKGEAR LNGFPMFITE IDGLDIHFIH
VRSRHANAMP MIMTHGWPGS VFELVKASGP LTDPTAHGAS ADDAFHVVVP SLPGFGFSGR
PTKTGWGSDH IARAWGELMA RLGYTRFVSQ GGDCGSVISH RMAMQRVQGL AGIHVNMPAT
VPPDIATLLQ VDAPAPASLS PKEKAAYEKL ATFYRDNCGY SAMMVTRPQT VGYALADSPS
GQAAWMYDKI SQWTYSGGVP ERSIPRDEIL DDISLYWLTN TATSSAQIYW EDHSNNFNAV
DISLPAAITV FPGEIYQAPR SWAERSYHNL IYFNEVDKGG HFAAWEEPEL FAREVRAGFR
PLRRA