| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3428 |
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| Symbol | |
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| ID | 6180112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 350332 |
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| End bp | 352257 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683197 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_001810111 |
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| Protein GI | 172062460 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTACA TCTACCGCAA GTACGGACGC GATCGCGCAG CGCTTACGGC CGCCGTCACG
ACGTACCGGC CCCGCAGCGC GTTGCGCGAA GCCGGCAAGG CGCTCGGCGT GGATCAGGCG
ATCGTCGATC GCGTGGCGAA GCAGCATCAC TGGTTCGATT CGCGCGCCGA TCTGCTGCAG
CGGTTTGCCG AGGCCGGCCT CGATCCCGAA GCGCCGCTCA ATCAGCAGTG GGCTGCGTTC
GCCGCGCAGT TGCTCGGCTA CCCACGGCCC CTGTCGCAGC ACTCGGGCGG CTTCGTGATC
AGCCGCGGCA AGCTCACGCG GCTCGTACCT GTCGAGAACG CAGCGATGGA GGATCGCTCG
ATCATCCAGT GGGACAAGGA CGACATCGAG GCGCTCGGCA TCCTGAAAAT CGACGTTCTG
GCGCTCGGCA TGCTGTCGAT GGTGCGCCGC GCGCTTGACA TGATCTCGGA GAAGCGCGGC
GAGACATTCG AGCTGCAGGA CATTCCGGCC GAGGACAAGG CGACCCACGA AATGCTGTGC
GATGGCGACA GCATGGGCGT GTTCCAGGTG GAATCGCGCG CGCAAATGTC AATGCTGCCG
CGCCTGCGCC CGCAGTGCTT CTACGACCTG GTGATCGAGG TCGCGATCGT GCGGCCGGGT
CCGGTGCAAG GCGGGATGGT GCATCCGTTT CTGCGCCGGC GCCAAGGGCT GGAGCCCGTC
ACGTTTCCGT CGGAAGGCAT GGAGAAAGCA CTGGCGCGCA CGCTCGGCGT GCCGATCTTC
CAGGAGCAGG TGATGCAGGT CGCGATGCTC GCGGCCGGAT TCTCCGCCGG CGAGGCCGAC
CAGCTGCGCC GCGCGATGGC GGCTTGGAAG CGTAAGGGGG GCCTGGAGCC ATACCACGAG
CGTCTGGTGA GCGGCATGCT CGAGCGGGGC TACGATCGCG AGTTCGCGGA ATCCATCTTC
GCGCAGATCA AGGGCTTCGG CGAATACGGC TTCCCGGAGA GCCACGCGGC CAGCTTCGCG
CTGCTCGTCT ACTCGAGCGC ATGGCTGCGT CGACACGAAC CGGCAGTGTT CCTGGCCGCC
CTGCTCAACA GCCAGCCGAT GGGCTTTTAC ACGCCGTCGC AGCTGCTGCA GGACGCGCGA
CGCCGCGGGG TTGAGGTGCT ACCCGTCGAC GTCAACGTCA GCACATGGGA TTCGGCGATC
GAAGGGCCCG CGACGTCGGC GCCCGTGCGT CTCGGCTTCT CACTGTTGCG CGGTATGCGG
CAGGATGTCG CCGGTCGAAT TGAGCTCGCG CGCGCCGCGC GGCCTTTCGT CGACATCGCG
GATCTCGCGC GCCGTGCGCG GCTCGATCGG CACGATCTGC AGGCGCTCGC GCGCGCGAAC
GCGCTTCGCT CACTCGCGGG CGGCAACCGA CGCGCGGCGC TTTGGCTCGC GGCCGCTGCC
GTGCCTGATC GAGATCTGCT GCGCGGCACC GAACGCGACG ACGCGGTGCC GGCGTTGCCT
CGAGCATCGG AGGGCCACGA GATCGTGACG GACTATCGCG CGATGGGCTT CACGCTCGGC
CGGCATCCGC TCGCGCTGCT GCGCGAGCGC CTCGCGCTCG ATCGCCTGCA GTCGGCCGAG
CAGCTCGCAA CGCTGCGCAG CGGGCAGCTC GCGCGTGCGT GCGGGTTGGT CACGGTACGC
CAACGGCCGG GCACGGCGAA CGGTGTCCTG TTCATGACGC TCGAAGACGA GACGGGCCAC
GTCAACGTGA TCCTCTGGCC CGGTCTGCTG GAGAAGTTCC GGAAGGAGGC GCTCGGCGCC
GCGCTGCTCG CGGTCTATGG CGTATGGCAG GCCGAAGACA AGGTGCGGCA CTTGATCGCG
AGCAAGCTCG TCGACCGGAC CGAGCTACTC GGGGCGCTGC CGACGACGGC GCGGGAGTTC
TGCTGA
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| Protein sequence | MQYIYRKYGR DRAALTAAVT TYRPRSALRE AGKALGVDQA IVDRVAKQHH WFDSRADLLQ
RFAEAGLDPE APLNQQWAAF AAQLLGYPRP LSQHSGGFVI SRGKLTRLVP VENAAMEDRS
IIQWDKDDIE ALGILKIDVL ALGMLSMVRR ALDMISEKRG ETFELQDIPA EDKATHEMLC
DGDSMGVFQV ESRAQMSMLP RLRPQCFYDL VIEVAIVRPG PVQGGMVHPF LRRRQGLEPV
TFPSEGMEKA LARTLGVPIF QEQVMQVAML AAGFSAGEAD QLRRAMAAWK RKGGLEPYHE
RLVSGMLERG YDREFAESIF AQIKGFGEYG FPESHAASFA LLVYSSAWLR RHEPAVFLAA
LLNSQPMGFY TPSQLLQDAR RRGVEVLPVD VNVSTWDSAI EGPATSAPVR LGFSLLRGMR
QDVAGRIELA RAARPFVDIA DLARRARLDR HDLQALARAN ALRSLAGGNR RAALWLAAAA
VPDRDLLRGT ERDDAVPALP RASEGHEIVT DYRAMGFTLG RHPLALLRER LALDRLQSAE
QLATLRSGQL ARACGLVTVR QRPGTANGVL FMTLEDETGH VNVILWPGLL EKFRKEALGA
ALLAVYGVWQ AEDKVRHLIA SKLVDRTELL GALPTTAREF C
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