Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3416 |
Symbol | |
ID | 6179280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 338302 |
End bp | 339453 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641683185 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001810099 |
Protein GI | 172062448 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCC GCATTCGTTC GCTTTCCGGC ATTGCATTGA CCGCCGCGGT CCTCGCGTTC CAGACGGGCG CGGCCCACGC GCAGGAGACG GTCGTCAAGG TCGGCGTGGC CGTGCCGCTG ACCGGCGGCG GCGCCGCGTA CGGCAAGGAC ATCGAGAACG GCGTGCGCAT GGCCGTCGAC GAGGCGAACG CCGCGCATAC GACGATCGGC GGCAAGCCGG TGAAGTTCGT CGTCGCGTCG CAGGACGACC AGAGCGATCC GCGCGTCGGC GTGCAGGCCG CGCAGCAGCT GACCGACGCG CAAGTGGCCG TCGTGATCGG CCACTTCAAT TCGGGCACGA CGCTGCCCGC GTCGAAGATC TACGCGAAGG CCGGCATTCC GATGATCACG CCGTCGGCGA CCAATCCCGA CATCACGCGT GCCGGCCTCG GCACCGTGTA CCGCGTGATC GCCACCGACG CGCAGAACGC CGGCAACGCC GGCGCCTATG CGGCGAGCGT GACCAAGGCG AAGCGCATCG CGATCATCGA CGACCGTACC GCGTTCGGCC AGGGCGAAGC CGACGAGTTC GAGAAGGCCG CGAAGGCGAA CGGCGGCACG ATCGTCGCGC GCGAATTCAC GAACGACAAG GCCGTCGACT TCAGCGCGCA GCTCACGAAG ATCAAGAGCA CGAACGCCGA CCTGGTGTTC TTCGGCGGCC TCGACGCGCA GTCGGCGATG CTCGTCAAGC GCATGCGCCA GCTCGGCATC CGCGCGCAGT TTCTGGCGGG CGGCGGCGTG ATGAACGCGA ACTTCATCAA GCTCGCCGGC AACGCGGCCG AAGGCGCGTC CGTGTGGGAG TACGGTCAGC CGCTGTCGCG TCTCGCGAAG GGCAAGCAGT TCGAAACGAA ATTCAAGCAG AAGTACGGCG TCGACATGCT CGCGTATGCG CCGTTCGCGT ACGACGCGAC GTGGATCGCG ATCAACGCGA TGCAGAAGGC GAACTCGACG AAGCCGGCCG ATTTCAACGG CGTGCTGAAG GGCACGCGCT ACGACGGCAT TACCGGCACG ATCGCGTTCA CGAACACGGG CGACCTGAAG AACCCGAGCT CGACGCTGTA TGAAGTGAAG AACGCCGCGT GGCAGCCCGT CACCACGCAA ACGGCGGACT GA
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Protein sequence | MTFRIRSLSG IALTAAVLAF QTGAAHAQET VVKVGVAVPL TGGGAAYGKD IENGVRMAVD EANAAHTTIG GKPVKFVVAS QDDQSDPRVG VQAAQQLTDA QVAVVIGHFN SGTTLPASKI YAKAGIPMIT PSATNPDITR AGLGTVYRVI ATDAQNAGNA GAYAASVTKA KRIAIIDDRT AFGQGEADEF EKAAKANGGT IVAREFTNDK AVDFSAQLTK IKSTNADLVF FGGLDAQSAM LVKRMRQLGI RAQFLAGGGV MNANFIKLAG NAAEGASVWE YGQPLSRLAK GKQFETKFKQ KYGVDMLAYA PFAYDATWIA INAMQKANST KPADFNGVLK GTRYDGITGT IAFTNTGDLK NPSSTLYEVK NAAWQPVTTQ TAD
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