Gene BamMC406_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3407 
Symbol 
ID6180064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp329452 
End bp330084 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID641683176 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001810090 
Protein GI172062439 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC ACGCCTTCTT CTCGGCCAAC CTGCTGCTCG CCTACACGGC TTATTTCATC 
GGCACGGCCA GCCCCGGCCC GAGCAATCTC GCGATCATGT CGGTTGCCGC GAACCATGGC
CGCAAGGCGG CGCTGGCGTT CGCGCTGGGC GTCATCTCGG GATCGATGTT CTGGGCGACG
GTGGCCGCGC TGGGCGTATC GGCGGCGCTG CTCGCATGGT CGAAGCTGCT GGTCGCGATC
AAGCTGTTCG GCGGCGCGTA TCTGCTGTGG CTCGCGTTCA AGTCGGGCCG CACCGCGTGG
TCGGCCAGAT CGGCCGATAC GCTGAACGCG GCGCCCGAGC AGAAGCTGTC GCGCCTCTAC
GTGCGCGGCG CGATGCTGCA CCTGACGAAT CCGAAAGCGA TCCTGGTGTG GGTCTCGATC
GTCGCGCTGT CGTCGAACGG CGCGGGCGCG TCGCACGGCG CTGTCGTGCC GGGCTGCATC
GCGATCGGAT GCGTGGTGTT CGGCGGCTAC GCGCTGGTGT TCTCGACCGA CAGCGCACGC
CGGCTGTACG TGCGCGGCCG GCGCGCGATG GAAGCGTGTC TCGCGGTGGT GTTCGGCGTG
GCGGGCGTCC GGTTGCTGGC GTCGAACGTA TAG
 
Protein sequence
MSVHAFFSAN LLLAYTAYFI GTASPGPSNL AIMSVAANHG RKAALAFALG VISGSMFWAT 
VAALGVSAAL LAWSKLLVAI KLFGGAYLLW LAFKSGRTAW SARSADTLNA APEQKLSRLY
VRGAMLHLTN PKAILVWVSI VALSSNGAGA SHGAVVPGCI AIGCVVFGGY ALVFSTDSAR
RLYVRGRRAM EACLAVVFGV AGVRLLASNV