Gene BamMC406_3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3405 
Symbol 
ID6179414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp327237 
End bp328472 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content71% 
IMG OID641683174 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001810088 
Protein GI172062437 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT TTGCGCCCCT CACCCTGCCC AATGGCGCGG TGATTCCCAA TCGCCTCGCC 
AAGGCCGCGA TGGAGGAAAA CATGGCCGAT GCGGATCACG CGCCGTCCGA CGCGTTGCTG
CGCCTGTACC AGGCGTGGGC CGACGGCGGG GCCGGCCTGA TCCTGACCGG CAACGTGATG
GTGGACGGCC GCGCGATGAC GGGGCCGAAC GGCGTCGTGC TCGACAGCGA CGCGCATCTC
GACCGCTTCC GGCGGTGGGC GCAGGTCGCG CGCTCCGGCG GCGCGCACGT GTGGATGCAG
ATCAACCATC CGGGGCGCCA GATGCAGGCG GCGCTCGGCC AGACGACGGT CGCGCCGTCG
GCCGTGCCGC TCGCGCTCGG TGCGCTGTCG AAGCAGTTCC CGGTGCCGAA GGAGATGACG
GAAGCCGATA TCGTCGACGT GCAGCAGCGC TTCGTGCGCG CCGCGCGGCT CGCCGAGCAA
AGCGGCTTCA CCGGCGTGCA GATCCACGCG GCGCATGGTT ACCTGCTGAG CCAGTTCCTG
TCGCCGCTGA CCAACCGCCG GCAGGACGCG TGGGGCGGCC GCATCGAGCA CCGCGCGCGG
CTGCTGCTCG ATATCGTGCG GGCTGTGCGC GCGACGGTGT CGCCGGCGTT CGTCGTGTCG
GTCAAGCTGA ATTCGGCCGA CTTCCAGCGC GGCGGCTTCA GCGCGGACGA TGCGAAGCGT
GTCGTCGAAC TGCTGAATCC GCTCGGCGTC GATCTCGTCG AGCTGTCGGG CGGCAGCTAC
GAAGTTCCGG CGATGCAGGG CGAGGCGCGC GACGGCCGCA CGTTGGCCCG CGAAGCGTAT
TTCCTCGAAT TCGCGCGGGA CATCACCGCC GTCGCGGCGA TGCCGCTGAT GGTGACGGGC
GGGATCCGGC GTCGCGCGGT GGCCGAGCAG GTGGTCGCCA GCGGCGTGGC AATGGTCGGC
ATCGCGACCG CGCTGTCGAT CGATCCGAAC CTGCCGCGCG ACTGGCGGGC CGGCAAGGAC
AGCGCGCCGG CGCTGCAGCC GATCCGGTGG AAGAACAAGG CGCTGGGCGC GCTGGCGAAC
ATGGCCGTCG TGAAGTTCCA GCTCGCGCGG TTGAGCGCCG GGCGGCGTAC GCATCCGGGC
GTGTCGCCGC TGCGCGCGCT GGTGTCGCAG CAGATGGCCG CGCAGTGCCA GACGCGGCGC
TACCGCAAGT GGATGGCGGG GCGGGCGGCG CGTTAG
 
Protein sequence
MNLFAPLTLP NGAVIPNRLA KAAMEENMAD ADHAPSDALL RLYQAWADGG AGLILTGNVM 
VDGRAMTGPN GVVLDSDAHL DRFRRWAQVA RSGGAHVWMQ INHPGRQMQA ALGQTTVAPS
AVPLALGALS KQFPVPKEMT EADIVDVQQR FVRAARLAEQ SGFTGVQIHA AHGYLLSQFL
SPLTNRRQDA WGGRIEHRAR LLLDIVRAVR ATVSPAFVVS VKLNSADFQR GGFSADDAKR
VVELLNPLGV DLVELSGGSY EVPAMQGEAR DGRTLAREAY FLEFARDITA VAAMPLMVTG
GIRRRAVAEQ VVASGVAMVG IATALSIDPN LPRDWRAGKD SAPALQPIRW KNKALGALAN
MAVVKFQLAR LSAGRRTHPG VSPLRALVSQ QMAAQCQTRR YRKWMAGRAA R