| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3378 |
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| Symbol | |
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| ID | 6179168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 296273 |
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| End bp | 297145 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683147 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001810061 |
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| Protein GI | 172062410 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.49834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAATG AACATCATGA CGGCGATACC CGGCTGACCG AGCAGGTCGT CGCCAGCTTC
GACGGTACGC CGAACCCGCG CTTGCGCGTG CTGATGCAGA GCCTCGTGCG GCACCTGCAT
GCGTTTGTCC GCGAAACGGA GCTGACCGAG GCCGAGTGGA TGACCGCGAT CCGCTTCCTG
ACCGAAACCG GGCAGATGTG CGACGACGTC GTGCGCCAGG AATTCATCCT GTTGTCGGAC
ACGCTGGGCG TGTCGATGCT GGTCGATGCG ATCAACCACC GTTTCGCCAC CGGCGCGACG
GAAACGACCG TGTTCGGGCC GTTCTACATC GAGGGCATGC CCGAGCGTGC GTACGGCGAG
AACATGGCGT TCACGCCCGG CACGCCCGTC GTCGTGCACG GCCGCGTGCT CGCCACCGAC
GGTGCGCCGG TGCCGGGCGC CGTGCTCGAC GTGTGGCAGA CCGCCGACAA CGGCATGTAT
TCCGGGCAGG ACAACGCACA GCCGCACGGC AATCTGCGCG GCCGCTACCG GACCGATGCC
GAAGGCCGTT ATGCGATTAC GACGATCCTG CCGGTCAGCT ATCCGATTCC GACCGACGGC
CCGGTCGGCA AGATGCTCGA TGCCACCGGA CGCCATCCGT GGCGGCCCGC GCACCTGCAC
TTCATGATCG ATGCGCCGGG CTACCGCAAG CTCGTCACGC ATCTGTTCGA CGAGGAGGAC
GCGTATCTGG AGTCGGATGC CGTGTTCGGC GTGAAGCCGT CGCTGATGGT CGCCTATCGG
CCGCGTGCGG CGGGCGATGA ACTTGCACGC CGGTTCGGGT TGAGCGGCGC GTACCGCGAA
GCGACGTATG ACTTCGTGCT CGACCGGAGC TGA
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| Protein sequence | MTNEHHDGDT RLTEQVVASF DGTPNPRLRV LMQSLVRHLH AFVRETELTE AEWMTAIRFL
TETGQMCDDV VRQEFILLSD TLGVSMLVDA INHRFATGAT ETTVFGPFYI EGMPERAYGE
NMAFTPGTPV VVHGRVLATD GAPVPGAVLD VWQTADNGMY SGQDNAQPHG NLRGRYRTDA
EGRYAITTIL PVSYPIPTDG PVGKMLDATG RHPWRPAHLH FMIDAPGYRK LVTHLFDEED
AYLESDAVFG VKPSLMVAYR PRAAGDELAR RFGLSGAYRE ATYDFVLDRS
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