| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3305 |
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| Symbol | |
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| ID | 6180396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 216148 |
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| End bp | 216735 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641683077 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001809991 |
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| Protein GI | 172062340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0116272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00327996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTACCGCC GTTTACTCGC ACCGGGGCTG CTGTTGCTGC TGGCCGCGTG CGCGCAGGAT
CCGTCCGTGA CCAGCAACAC GGTGCGGATC TGCGACGACA CCGGTTGTTC CCATCGCCCT
AAAGATCAGG TGTCCTACCA AAATAAGGAC GATGCGGAAG ATCGCGAAGA CCCGCGCATC
GCCGCGTTGA AGCAAGCCGC GAAGGCCCAG CCGAAGGCGG CCTACGATCT CGGCCTGCGT
TATTTCCGCG GCGACGGCGT GCGTCAGGAC AGCTACCAGG CACTCAAATG GATGCGCGAC
GCAGCCGAGC GCGGCGATCT GCGCGCGCAG AAGGCGCTCG GCGGTTTCTA CCTGTTCGGC
CTCGAGGAAA TGGGCTCCGA TCCGCGCGAA GCGGAAAAGT GGCTGTCGAT CGCGGCCGGC
CGCGGCGACA AGGAATCGAA GCGGCTGCTC GAGCTCGCGC GCAAGGCCAA AAAGGAAGAC
GAAGAAGACT GGAAATGGCG CACGCAATGG CGTGACGTCT ATTACGGCTA CTGGTACTCG
GGCTATCCGT ACTACGGCGT CTGGAATCAG ACGTACTGGT ACTACTGA
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| Protein sequence | MYRRLLAPGL LLLLAACAQD PSVTSNTVRI CDDTGCSHRP KDQVSYQNKD DAEDREDPRI
AALKQAAKAQ PKAAYDLGLR YFRGDGVRQD SYQALKWMRD AAERGDLRAQ KALGGFYLFG
LEEMGSDPRE AEKWLSIAAG RGDKESKRLL ELARKAKKED EEDWKWRTQW RDVYYGYWYS
GYPYYGVWNQ TYWYY
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