Gene BamMC406_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3299 
Symbol 
ID6179696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp210706 
End bp211407 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID641683071 
Producthypothetical protein 
Protein accessionYP_001809985 
Protein GI172062334 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0140803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTC CGCATCGCGT CACCGAACCG AACATCCTCT ATTTCGGCAC GCCCGTCGTG 
CTGGTGAGCA CGCTGAATCC GGACGGCACA GCAAATCTCG CACCGATCTC GTCCGCGTTC
TGGCTCGGCT GGCGCGGCGT GATCGGCATC GCCGCCAGCT CGCAGACCAC CCGCAACCTG
ACGCGCACCG GCGAATGCGT GCTGAACCTG CCGTCGTCCG CGCAGGCGCA CGCGGTCGAC
CGGATCGCAC GGACGACGGG CACGCATCCG GTGCCCGAAT CGAAGCGCGT GAGAGGCTAC
GTGTACGAAC CCGACAAGTT CGGGGCGGCG GGGCTCATCG AGGCGGCATC GCACACCGTG
TCGCCGCCTC GCGCGCTCGA ATGCCCGGTA CATCTGGAAG CGGTCGTCGC GGCCACGCAT
GGCCTCTCCG ATGAAACGCC CGACCTGCGC GGGAAGATCA CGCTGTTCGA GCTGCGCATC
CAGCGCGTGC ACGTGCATCC GGACCTGCTG CTGGATGGCC ATCAAGACCG CATCGATCCG
GACAAATGGT CGCCGCTGAT CATGAGCTTC CAGAAATTCT ATGGCCTGGG GCCTCGACAA
GTGCATGCGT CGCGGCTCGC CGAGATTCCC GAGCGCGCGT ATCGCAGCCC GGACATCGAG
CGCTCGCGGG AAGCGGGCGT TCCGGCTGGC GCCGGGCAGT AA
 
Protein sequence
MNAPHRVTEP NILYFGTPVV LVSTLNPDGT ANLAPISSAF WLGWRGVIGI AASSQTTRNL 
TRTGECVLNL PSSAQAHAVD RIARTTGTHP VPESKRVRGY VYEPDKFGAA GLIEAASHTV
SPPRALECPV HLEAVVAATH GLSDETPDLR GKITLFELRI QRVHVHPDLL LDGHQDRIDP
DKWSPLIMSF QKFYGLGPRQ VHASRLAEIP ERAYRSPDIE RSREAGVPAG AGQ