Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3299 |
Symbol | |
ID | 6179696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 210706 |
End bp | 211407 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641683071 |
Product | hypothetical protein |
Protein accession | YP_001809985 |
Protein GI | 172062334 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0140803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCTC CGCATCGCGT CACCGAACCG AACATCCTCT ATTTCGGCAC GCCCGTCGTG CTGGTGAGCA CGCTGAATCC GGACGGCACA GCAAATCTCG CACCGATCTC GTCCGCGTTC TGGCTCGGCT GGCGCGGCGT GATCGGCATC GCCGCCAGCT CGCAGACCAC CCGCAACCTG ACGCGCACCG GCGAATGCGT GCTGAACCTG CCGTCGTCCG CGCAGGCGCA CGCGGTCGAC CGGATCGCAC GGACGACGGG CACGCATCCG GTGCCCGAAT CGAAGCGCGT GAGAGGCTAC GTGTACGAAC CCGACAAGTT CGGGGCGGCG GGGCTCATCG AGGCGGCATC GCACACCGTG TCGCCGCCTC GCGCGCTCGA ATGCCCGGTA CATCTGGAAG CGGTCGTCGC GGCCACGCAT GGCCTCTCCG ATGAAACGCC CGACCTGCGC GGGAAGATCA CGCTGTTCGA GCTGCGCATC CAGCGCGTGC ACGTGCATCC GGACCTGCTG CTGGATGGCC ATCAAGACCG CATCGATCCG GACAAATGGT CGCCGCTGAT CATGAGCTTC CAGAAATTCT ATGGCCTGGG GCCTCGACAA GTGCATGCGT CGCGGCTCGC CGAGATTCCC GAGCGCGCGT ATCGCAGCCC GGACATCGAG CGCTCGCGGG AAGCGGGCGT TCCGGCTGGC GCCGGGCAGT AA
|
Protein sequence | MNAPHRVTEP NILYFGTPVV LVSTLNPDGT ANLAPISSAF WLGWRGVIGI AASSQTTRNL TRTGECVLNL PSSAQAHAVD RIARTTGTHP VPESKRVRGY VYEPDKFGAA GLIEAASHTV SPPRALECPV HLEAVVAATH GLSDETPDLR GKITLFELRI QRVHVHPDLL LDGHQDRIDP DKWSPLIMSF QKFYGLGPRQ VHASRLAEIP ERAYRSPDIE RSREAGVPAG AGQ
|
| |