| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3290 |
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| Symbol | |
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| ID | 6179983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 201787 |
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| End bp | 202380 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641683064 |
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| Product | fimbrial protein |
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| Protein accession | YP_001809978 |
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| Protein GI | 172062327 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0324288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TCTCGATGAT GGTGGCTGCT GCCGGTTTCG CATTCGCGGC GATGAATGCA
GCACAAGCTG CGGACGGGAC GATTAACTTT ACGGGCGAGA TCGTCGCGGC GTCGTGTGGC
ATTACGGGCG GTAACGGGAC GTCCGTGACC GGTGGCAAGG GCGATCAGTC GATCGACGTC
AAGATGGGCA AGGTCAGCGT GGACGCGCTG GGCTCCGCAG GCGGCGGCGG CATCGCGGCC
GGTACGGCGA TCAACCTCAA CCTCGACTGC GGTGCAACCG CCAAGGGCCT GAACACGGTC
AAGGTGCGCT TCGACCCGGC CAGCGGCTCG GGCGTGGACG GCACCAACAA CAAACTGCTG
AAGACCACCG GCACGGCCAA GGGCGTGGGC ATCGGCATCT ACAACACCGC AGGCACGCTG
CTGAACCTGA ACGCCAACGA GACGTTCGAC GCACCGCTGG TCCAAGGCGG TACGGAGGAA
GCACCGACCT ACACGGCCAA CCTGGGGCTC CGCGCTGGCT ACGTAAAGGC CGGCGCCACC
GTCGAGGCCG GTACTGCCAA CGGCACGCTG CCGTTCACGC TGACCTACGA GTAA
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| Protein sequence | MKKISMMVAA AGFAFAAMNA AQAADGTINF TGEIVAASCG ITGGNGTSVT GGKGDQSIDV
KMGKVSVDAL GSAGGGGIAA GTAINLNLDC GATAKGLNTV KVRFDPASGS GVDGTNNKLL
KTTGTAKGVG IGIYNTAGTL LNLNANETFD APLVQGGTEE APTYTANLGL RAGYVKAGAT
VEAGTANGTL PFTLTYE
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