| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3289 |
|---|
| Symbol | |
|---|
| ID | 6179519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 199536 |
|---|
| End bp | 199940 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641683063 |
|---|
| Product | fimbrial protein |
|---|
| Protein accession | YP_001809977 |
|---|
| Protein GI | 172062326 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.222873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCAACGC TTGTCTCGGC AAGCCTGAAG GCCACCGGTG ACGTGGCGTC TGCCCGATCG
GCGCCGTTCT CGGTCGGCCT GAACTGCGAT GCGAACGTCA GTGTGTACGC AACCTTGACC
GATGCGTCGA ATCCGGCCAA TACGGGTAGC GCCCTCAACC TCGCGCCCGG TTCGACGGCT
GCCGGTATCG GGATTCAAAT CCTCAAAAAA GGCGAGGGCA CCCCGTTGAG TTTCGGGCCG
GATTCGTCCC GCAAGGGCAA TATCAACCAG TGGATGGTCG GCAAATCGTC TACCGCCAAC
ACCCAATTGT CGGTGCCGTT CGAGGCCAGA TACGTGAAAG TCGCGGAAAC GATCAAGCCG
GGCTCCGTGA GCGCACGCGG CACGATTACG TTTTCGTATC AGTAG
|
|---|
| Protein sequence | MPTLVSASLK ATGDVASARS APFSVGLNCD ANVSVYATLT DASNPANTGS ALNLAPGSTA
AGIGIQILKK GEGTPLSFGP DSSRKGNINQ WMVGKSSTAN TQLSVPFEAR YVKVAETIKP
GSVSARGTIT FSYQ
|
|---|
| |