| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3233 |
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| Symbol | |
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| ID | 6179150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 136283 |
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| End bp | 137116 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683008 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001809922 |
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| Protein GI | 172062271 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.638648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAC TGTCTCGTTT CACCCGTCAA ATCGCCGCGT GCACCGTGGC AGCCGCGGCG
CTGGTCGCGG CCGCTCCGTC GGACGCCGCC GGGCCCGACG CCTGGGCCGC CGTGAAGAAG
GCCGGCGTAC TGCGCTGCGG CGCCGCGGTC GCGCCGCCGT ACGTGATGCG CGACCCGAAG
ACGGGCGCCT ACAGCGGTTT CTTCTCGGAT CTGTGCCGCG ATTTCGGGCA GAACGTGCTG
AAGGTGAAGG TCGAATTCGT CGACACGAGC TGGGACAACA TCGTGGCCGG CCTGCAATCG
GACAAATGGG ACCTGTCGCT CGCGCTGAAC GACACGCCCG AGCGTGAGAA GGCCGTCGCG
TTCTCCGTGC CGGCGACCGA CTACAACGTC TCGTTCGTCT ACAACCGGAA CAACCCGAAG
ATCGCGAAGA ACCTGCGCTC GCTCGCCGAT ATCGACAAGC CGAACGTCAC GGTCGCGGTG
ATGTCCGGCA CGTCGCAGGA CAAGGCGATT TCGGCGGAAT TGAAACAGGC GCGGATCATG
CGGCTGCCGG GCAACGACGA GACACGCCTG TCGCTGATCT CGAAGCGCGC CGACCTGCTC
GCCGACGCGA ACATCACCAA CATGCTGCTG ACTGAAGCGC ACCCGGACTG GGCGGCCAGC
TTCAACCCCG CGCCGCCGCT CGCGCAGCAG GAAGTGGCGT TCGGCCTGCG CAAGGACACG
CCGAAGGCCG ATCTCGACGT GCTCAACAGC TACCTCGCCC AGCAGGTCAA GTCGGGCGCG
GTGAACCGTC TGATCAAGAC GTCCGTGCAA GCGATGCTCA CCCCCGGCAA GTAA
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| Protein sequence | MNRLSRFTRQ IAACTVAAAA LVAAAPSDAA GPDAWAAVKK AGVLRCGAAV APPYVMRDPK
TGAYSGFFSD LCRDFGQNVL KVKVEFVDTS WDNIVAGLQS DKWDLSLALN DTPEREKAVA
FSVPATDYNV SFVYNRNNPK IAKNLRSLAD IDKPNVTVAV MSGTSQDKAI SAELKQARIM
RLPGNDETRL SLISKRADLL ADANITNMLL TEAHPDWAAS FNPAPPLAQQ EVAFGLRKDT
PKADLDVLNS YLAQQVKSGA VNRLIKTSVQ AMLTPGK
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