Gene BamMC406_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3126 
Symbol 
ID6179486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp22097 
End bp22837 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content63% 
IMG OID641682902 
Productacetoacetate decarboxylase 
Protein accessionYP_001809816 
Protein GI172062165 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4689] Acetoacetate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.898077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.894092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA GCGATGTCCG ATCGAAAGCG TTTGCGATGC CGTTGACGAG CCCCGCTTTC 
CCGATGGGGC CGTACCGTTT CGTCGATCGT GAGTTTCTGA TCATCACGTA TCGCACCGAT
CCGGACCGCC TGCGTGAGAT TGTCCCCGAG CCGCTGCAGA TCACCGAGCC GCTCGTACAT
TACGAATTCA TTCGCATGGC CGATTCGACC GGCTTCGGCG ACTACACCGA AAGCGGTCAG
GTGATCCCCG TCGAATACAA CGGCCAGGCC GGCGGCTACA CGCTCGCGAT GTATCTCGAC
GATCACCCGC CGATCGCCGG CGGCCGCGAG CTGTGGGGCT TCCCGAAGAA GCTCGCGTCG
CCCACGCTGC ACGTGAACAC CGATCACATC CTCGGCACGC TCGACTACGG CAAGGTGCGC
GTCGCGACCG GCACGATGGG CTACAAGCAC AAGGACCTCG ACATCGAAGA GCAGGCGAAA
CGCCTCGCCG GCCCGAACTT CCTGCTGAAG ATCATCCCGC ACGTCGACGG CACCGCCCGC
GTGTGCGAAC TCGTGCGCTA CTACATGCAG GACATCAAGA TGAAGGGCGC ATGGACGGGC
CCCGCGTCGC TCGAGCTGGC ACCGCACGCC CTTGCGCCGG TGGCCGACCT GCCGGTGCTC
GAGATCGTCG AAGCGCGCCA CATCGTCGCG GATTTGACGC TCGGCCTCGG CGAAGTCGTC
TACGATTACC TGGCTCAATA A
 
Protein sequence
MKISDVRSKA FAMPLTSPAF PMGPYRFVDR EFLIITYRTD PDRLREIVPE PLQITEPLVH 
YEFIRMADST GFGDYTESGQ VIPVEYNGQA GGYTLAMYLD DHPPIAGGRE LWGFPKKLAS
PTLHVNTDHI LGTLDYGKVR VATGTMGYKH KDLDIEEQAK RLAGPNFLLK IIPHVDGTAR
VCELVRYYMQ DIKMKGAWTG PASLELAPHA LAPVADLPVL EIVEARHIVA DLTLGLGEVV
YDYLAQ