| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3120 |
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| Symbol | |
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| ID | 6180492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 16127 |
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| End bp | 17119 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682896 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001809810 |
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| Protein GI | 172062159 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.540342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAT TTTATTTATT TCCAATCAGA TTAAAATCAC GTGAAAGGTT AATCGACTTT
ACACGAATCG TGAACAAATC GCCGAATCTC GACGACCTGC GCGTATTCAG CCTGGTCGTC
CGCTTGACGA GCTTCAGCGC GGCCGCCGAG CAGCTCGCGG TGTCGCCCGC GTACGTGAGC
AAGCGCATCG CGCTGCTCGA GGCGCAGCTC GGCACGCGGC TGCTGCATCG CTCGACGCGC
CGCGTGACGG TCACGGAAGC CGGCGAGCGC GTGTTCGCGC GTGCCGAGAA GATTCTCGAC
GACGTCGATC ATCTCGTCGA GGACGTGTCG ACCACGCGCA CGGTGCCGCG CGGCACGCTG
CGCATCTCGA GCAGCTTCGG CTTCGGCCGC CATGTCGTCG CGCCCGCGCT GCTCGACTTC
TCCGCGCGCT ATCCGCAGCT CAACGTGCGG CTCGATCTGT TCGACCGGCT CGTCGACGTC
GCGGGCGAAG GCTACGACCT CGACGTGCGC ATCGGCGACG AGATCGCCGA CCACCTGATC
GCGCGCCGCC TCGCCACCAA CCATCGTGTG CTGTGCGCGT CGCCCGACTA TCTCGCACGG
CGCGGCACGC CGCGCACGCT CGCGGATCTC GCGTCGCACG ACTGTCTCGC AATCAAGGAG
CGCGACCATC CGTTCGGCGT CTGGCGGTTG AATGTGCGCG GGGAAACGGC AACGGTGAAG
GTCGGCGGCG CGCTGTCGAC GAACCACGGC GAGGTGGCCG TGCAGTGGGC GCTGGCCGGA
CGCGGGATCG TGCTGCGTTC GATCTGGGAA GCGGCGCCGC TGATCGAGCG CGGCGAGCTC
TGTCGCGTGC TGCCGGACGC GATTCAGCCG GCGAACATCT GGGCCGTGTA TCCGGAACGC
GTCGCGGCGT CGGCGAAGGT GCGCGTGTGC GTCGATTTTC TGGTGGAGGC GCTCGCCGGG
TTGAATGCCG CGGCGAGCGA CGATGCGGGC TGA
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| Protein sequence | MTPFYLFPIR LKSRERLIDF TRIVNKSPNL DDLRVFSLVV RLTSFSAAAE QLAVSPAYVS
KRIALLEAQL GTRLLHRSTR RVTVTEAGER VFARAEKILD DVDHLVEDVS TTRTVPRGTL
RISSSFGFGR HVVAPALLDF SARYPQLNVR LDLFDRLVDV AGEGYDLDVR IGDEIADHLI
ARRLATNHRV LCASPDYLAR RGTPRTLADL ASHDCLAIKE RDHPFGVWRL NVRGETATVK
VGGALSTNHG EVAVQWALAG RGIVLRSIWE AAPLIERGEL CRVLPDAIQP ANIWAVYPER
VAASAKVRVC VDFLVEALAG LNAAASDDAG
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