Gene BamMC406_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3117 
Symbol 
ID6181386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp13344 
End bp13958 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID641682893 
ProductTetR family transcriptional regulator 
Protein accessionYP_001809807 
Protein GI172062156 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.490432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC ATGATGACCT CTCCGGCGAA CCGGCCGTTC GCGACCGGCT GCTCGACGCG 
GCCGAAGCGC TGATCTACTC GGGCGGCATT CACGCCACGG GTGTCGATGC GATCGTGAAG
CGATCCGGCG CAGCGCGAAA GAGCTTCTAT TCGCATTTCG AATCGAAGGA GGCGCTGGTC
GTCGCCGCGC TCGAGCGCCG TGACGAACGC TGGATGCGCT GGTTTGTCGA TGCAACGCTC
TCGCGCGGCA AGTCGCCGCG CGCGCATTTG CTCGGCATGT TCGATGCGCT GCGCGACTGG
TTTGCGCAAC CCGATTTTCA CGGCTGTGCG TTCCTGAACG CATCCGGCGA GATTGCCGAC
GCCGACGATC CGGTGCGCGT CGTCGCGCGT ATGCACAAGG CGCGTCTGCT GGCGTTCGTG
CGCGAGCGGT TCGACGCGTA TGCCGACGAC GCCGGCATCG AGCGTCGTGG GCTGGCCCGT
CTCGCGCGCC AATGGCTGGT GCTGATCGAC GGCGCGATCG GCGTGGCGCT CGTCAGCGGC
GATGTAACCG CCGCGCGCGA TGCGCGCGCA ACGGCAGAAC TCTTGCTCGA TACGGTGTCT
CGAGCGTCGA AGTAG
 
Protein sequence
MNTHDDLSGE PAVRDRLLDA AEALIYSGGI HATGVDAIVK RSGAARKSFY SHFESKEALV 
VAALERRDER WMRWFVDATL SRGKSPRAHL LGMFDALRDW FAQPDFHGCA FLNASGEIAD
ADDPVRVVAR MHKARLLAFV RERFDAYADD AGIERRGLAR LARQWLVLID GAIGVALVSG
DVTAARDARA TAELLLDTVS RASK