Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3117 |
Symbol | |
ID | 6181386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 13344 |
End bp | 13958 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641682893 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001809807 |
Protein GI | 172062156 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.490432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACAC ATGATGACCT CTCCGGCGAA CCGGCCGTTC GCGACCGGCT GCTCGACGCG GCCGAAGCGC TGATCTACTC GGGCGGCATT CACGCCACGG GTGTCGATGC GATCGTGAAG CGATCCGGCG CAGCGCGAAA GAGCTTCTAT TCGCATTTCG AATCGAAGGA GGCGCTGGTC GTCGCCGCGC TCGAGCGCCG TGACGAACGC TGGATGCGCT GGTTTGTCGA TGCAACGCTC TCGCGCGGCA AGTCGCCGCG CGCGCATTTG CTCGGCATGT TCGATGCGCT GCGCGACTGG TTTGCGCAAC CCGATTTTCA CGGCTGTGCG TTCCTGAACG CATCCGGCGA GATTGCCGAC GCCGACGATC CGGTGCGCGT CGTCGCGCGT ATGCACAAGG CGCGTCTGCT GGCGTTCGTG CGCGAGCGGT TCGACGCGTA TGCCGACGAC GCCGGCATCG AGCGTCGTGG GCTGGCCCGT CTCGCGCGCC AATGGCTGGT GCTGATCGAC GGCGCGATCG GCGTGGCGCT CGTCAGCGGC GATGTAACCG CCGCGCGCGA TGCGCGCGCA ACGGCAGAAC TCTTGCTCGA TACGGTGTCT CGAGCGTCGA AGTAG
|
Protein sequence | MNTHDDLSGE PAVRDRLLDA AEALIYSGGI HATGVDAIVK RSGAARKSFY SHFESKEALV VAALERRDER WMRWFVDATL SRGKSPRAHL LGMFDALRDW FAQPDFHGCA FLNASGEIAD ADDPVRVVAR MHKARLLAFV RERFDAYADD AGIERRGLAR LARQWLVLID GAIGVALVSG DVTAARDARA TAELLLDTVS RASK
|
| |