| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3029 |
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| Symbol | |
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| ID | 6178975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3359955 |
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| End bp | 3361622 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641682805 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001809721 |
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| Protein GI | 172062069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGC GATCGATGAA GGAGACCGTA CTCGTCTGGA TCGCAATGCC GATCGTCGTG
TTCGGCGGCG CGTGGGCACT GGCCGGGCTG CCCGATTGGC AAAGCGCGTT ATGCATCGCA
TTGGCGGTCG CGTTCGCGAT GTGGGTTGCC GCGTGGTCGG AGCGTCGGCG CCCGGTGGAG
GCTTCCGCCG AGCCTGCCGA ACAAGCGATC GGCAGCACGG CGCGCGAACT CGAGGTGATC
GTCGTCGTCG GGCCCTATGC GGCCGCGCTG TTTCCACGCG ACGGCGGGCG GGCGACGCTC
AGGCGCGACG ACCGGGCGGT GTGGCTGCTG GCCGATACGC CGACGCGGCT GAACGATGTA
ATGACGCAAG TCAAGGCGGC GCGAGGGCGT TTCCCGGACG CCGCGCTGCT GCCGGTGGTA
CCGGAGGGCG ATGACGAAAG CGTATTGCGT CGAGAGTTCG CGCAATGGCG CATTGCACTG
CAGGCGGCGT ATTGCCATCC CGAATGCGTG TTGCCTTGTC ACGTCGCGGT GTATGCGTGT
CTGGGGCCGG GCGAGGACGG CACGCCGCAA ACGCGATGGT TTGGCGATGC GCTCGAATTC
AACGCTCCGC ACGTCACGGA GGCAATCGGG CTGTCCGACC GGTTGCCGGC GATCCGCGGC
AGCCTGGCCG AGTCGCGGCA CGCCGAGGCG GCCGTGCGGA GCGCACTGGG GCTCGCGGTA
TTCGAATGGC TCGACGAGGC GGCGTTGCTG TCGTCGATCT CCGCGTTGTC GAATACCGTG
CCGTTTGCGC TACAGGGCGC TTCGCTGGCG GACATCGACC ATACGCCGAT TCGGCCGGGC
GCATGGACCC GCTGGCTGAT TGCCAGAACC GGCCTGCAGC CACGCGTGAC GAAGCCGGTG
GCGGGGCCGC TTCCGCTGCC GCGTATTCAC GCGTCGGCTC CAGGTTCAGC GGGTCCGGCC
AAGCGGCACC TGCTGCCATC GCCGGTCAAC CGGAGGGAGT GGCCGCTCGC GTCACACGTG
CTGCTGTCGA GTGTGGTTGC CACGACCGTA GCCGTGGCCA TATCGGGCGC AGTGAATTAT
CGGATCGTCG AGCGGATCTC GGATGACCTG TCTGCCTATT GGAACACGCC GGCCGTCCGG
ATCACCGCGT CGATCGACTC GTTCGAGCGG CTGCGTGCGG CGCGCGACGA AGTGGCGCGC
AATCTGCGCG ACGGCGCGCC GTTCGGCGCG GGCTGGGGAC TATATCCGGG GCGCGCGCTG
TTGCCTCGCG TCGACGTAGC GCTGACGGCC TATCAGCCGC CGCTCACGAC CGTACAGATC
GATAGCCTTT CGCTGTTTGC AAGCGGCAAG GCAACATTTT CCCCTGCTCA CGAACGTCGC
GAACTGGCGC ATGTGCTTCG GCTGATCCGC GAGAATCCGG ACCAGCGCGT GCTGATCGAG
GGGCATGCGG ACAGTGAGGG ATCGGCCGAC GCGAACCTTC GGCTGTCCGA AGCACGGGCG
CGTGCGATCC GCGATTGGCT TGTCGCCGAA GGCGGGTTGT CGGTCGCGCG TTTCGCGATT
CAAGGAATGG GCGACATCCG TCCGATCGCG GACAACCGCA GCGAGGCGGG CCGGGCATTG
AACAGGCGTG TCGACGTTTC GCTGATCCCG GACGGCGTGC GTCATTGA
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| Protein sequence | MSMRSMKETV LVWIAMPIVV FGGAWALAGL PDWQSALCIA LAVAFAMWVA AWSERRRPVE
ASAEPAEQAI GSTARELEVI VVVGPYAAAL FPRDGGRATL RRDDRAVWLL ADTPTRLNDV
MTQVKAARGR FPDAALLPVV PEGDDESVLR REFAQWRIAL QAAYCHPECV LPCHVAVYAC
LGPGEDGTPQ TRWFGDALEF NAPHVTEAIG LSDRLPAIRG SLAESRHAEA AVRSALGLAV
FEWLDEAALL SSISALSNTV PFALQGASLA DIDHTPIRPG AWTRWLIART GLQPRVTKPV
AGPLPLPRIH ASAPGSAGPA KRHLLPSPVN RREWPLASHV LLSSVVATTV AVAISGAVNY
RIVERISDDL SAYWNTPAVR ITASIDSFER LRAARDEVAR NLRDGAPFGA GWGLYPGRAL
LPRVDVALTA YQPPLTTVQI DSLSLFASGK ATFSPAHERR ELAHVLRLIR ENPDQRVLIE
GHADSEGSAD ANLRLSEARA RAIRDWLVAE GGLSVARFAI QGMGDIRPIA DNRSEAGRAL
NRRVDVSLIP DGVRH
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