Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3002 |
Symbol | |
ID | 6177086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3324022 |
End bp | 3324564 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641682778 |
Product | two component Fis family transcriptional regulator |
Protein accession | YP_001809694 |
Protein GI | 172062042 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.593842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA ACAATTTCCT GGTGATCGAC GACAACGAGG TGTTCGCGGG CACGCTCGCG CGCGGTCTCG AGCGCCGCGG CTATGCGGTC CAGCAGGCGC ACGACAAGGA GGCGGCGCTG CGGCTCGCGG CCGGCGGCAA GTTCCAGTTC ATCACCGTCG ACCTGCATCT CGGCGAGGAT TCGGGGCTGA GCCTGATCGC GCCGCTGTGC GACCTGCAAC CCGACGCGCG GATCCTCGTG CTGACCGGCT ATGCGAGCAT CGCGACCGCC GTGCAGGCCG TGAAGGAGGG CGCCGACAAC TATCTCGCGA AGCCGGCGAA CATCGAGTCG ATCCTGGCCG CGCTGCAGAC CAACGCCAGC GAAGTGCAGG CCGACGAGGC GCTCGAGAAT CCGGTCGTGC TGTCGGTCGA CCGGCTCGAA TGGGAGCACA TCCAGCGCGT GCTCGCGGAG AACAACAACA ACATCTCGGC CACCGCGCGC GCGCTGAACA TGCACCGCCG CACGCTGCAG CGCAAGCTCG CGAAGAAGCC GGTGCGCCAG TAA
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Protein sequence | MSENNFLVID DNEVFAGTLA RGLERRGYAV QQAHDKEAAL RLAAGGKFQF ITVDLHLGED SGLSLIAPLC DLQPDARILV LTGYASIATA VQAVKEGADN YLAKPANIES ILAALQTNAS EVQADEALEN PVVLSVDRLE WEHIQRVLAE NNNNISATAR ALNMHRRTLQ RKLAKKPVRQ
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