Gene BamMC406_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2873 
Symbol 
ID6177904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3193064 
End bp3193966 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID641682649 
Producthypothetical protein 
Protein accessionYP_001809565 
Protein GI172061913 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGA ACGAAACCCG ACGCGGCGCC GCCGAGATGG TCGCCGCGAT GATGATGTCC 
GGCACGATCG GCTGGCTCGT GATGTCGTCG CAGCAACCGC TCACCAACGT CGTGTTCTTC
CGCTGCCTGT TCGGCGCCGC GACGCTCGCG ATCGTCTGCG CGGCGCTCGG CTTCCTGCGC
CGCGCGCTGT TCTCGCCGCG CATGCTCGCG CTCGCGACGC TCGGCAGCGT CGCGATCGTC
GCGAACTGGC TGCTGCTGTT CGCCGCGTAT TCACGCGCGT CGATCTCGAT GGCGACCGCC
GTCTACAACA CGCAGCCGTT CATGCTCGTC GCGCTCGGCG CGATCGTGTT CCGCGAACGG
ATCAACGCAT CGACGATCAC GTGGCTCGCG CTCGCCTTCG TCGGGCTCGT GTGCGTGGTG
CGGGTCGAGC CGGCAGTGCT CGCGGTACCC GGCGAATATC TCGAAGGCGT CGCGCTGTCG
CTCGGCGCGG CGTTCCTGTA CGCGGTGTCG TCGATCGTCA CGAAGCACCT GAAGGGCACG
CCGCCACATC TGCTCGCGCT GCTGCAGGCC GGCCTCGGCA TCGTGCTGCT CGCGCCGTTC
GCCCACTTCG GCACGTTGCC CGCGACGCCC GCGCAGTGGC TCGATCTCGT CGTGCTCGGC
GTCGTGAACA CCGGCGTGAT GTATGTGCTG CTGTACGGCG CGATCCAGAA GCTGCCGGTC
GCGATGACGG GCGCGCTGTC GTTCGTCTAT CCGGTCGTCG CGATCATCGT CGATCGCGTC
GCGTTCGGGC AGACTCTCGC GTGGACGCAG GTGCTCGGCG CGCTGCTGAT CCTGCTCGCG
GCGGCCGGCG TGAACCTCGG CTGGCGCATC GTGCCCGCGC GTCGCGCGAG CGTCGGCAAC
TGA
 
Protein sequence
MASNETRRGA AEMVAAMMMS GTIGWLVMSS QQPLTNVVFF RCLFGAATLA IVCAALGFLR 
RALFSPRMLA LATLGSVAIV ANWLLLFAAY SRASISMATA VYNTQPFMLV ALGAIVFRER
INASTITWLA LAFVGLVCVV RVEPAVLAVP GEYLEGVALS LGAAFLYAVS SIVTKHLKGT
PPHLLALLQA GLGIVLLAPF AHFGTLPATP AQWLDLVVLG VVNTGVMYVL LYGAIQKLPV
AMTGALSFVY PVVAIIVDRV AFGQTLAWTQ VLGALLILLA AAGVNLGWRI VPARRASVGN