| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2857 |
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| Symbol | |
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| ID | 6177893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3175219 |
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| End bp | 3176265 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641682633 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001809549 |
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| Protein GI | 172061897 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.682675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAC AACACAATGC CCATGGCGCG ACGCCGCTCG CGGCACCCGA CGCCGCGCTG
GCCCGACCGA ACTTCGACGT CGCCGCGTTG CGCAGCCTGG TGGCGGGCGT GGATCTCGGC
AGCTTCGCGA AGGCTGCCGA TCGCGTCGCG CGTTCGTCGT CGGCGGTGAG CGCGCAGATC
CGCAAGCTCG AGGAGCAGGC CGGCACGCCG CTGTTCGTGA AGGCCGGGCG CGGGCTCGCG
CTGACCGACG CCGGCGACGC GATGCTGCGC TATGCGCGGC GGATGATCGA ACTGAACGAC
GAAGCGGCCG CGGCCGTGCG CGGCGTGAAT CTCGACGGCT GGGTGCGGGT CGGCCTGCAG
GAGGATTTCG GCGAGGCGAT CCTGCCCGAC GTGCTCGGAC GGTTCGCGCG TGCGCATCCG
AAGGTGAGGA TCGAGGCGCG CGTCGCGCGC AACGCGGAGC TGCTCGAGCG GCTCGACGCG
AACCAGCTCG ATCTCGCGCT GGTGTGGGGC GACCCGGCGT CGGCGACGCT CGTGTCGCGC
GCGGGCATCG ACAGCGACGC GATCGCGCAG GTGCCGATGC AGTGGATCGC GGCGGTCGGC
GCGGCGGGCC TGGGCATGTC GGACGGCGGC GGCCCGGCGG ATGCGGCCGA CGACGGCGAC
GCGAGTCTGC GTGTGATGCG CGCGTCGGGC GAGCCGCTGC CGCTCGTCGT GTTCGACCGG
CCGTGCCGGT TCTTCGGCGC GGCGACCGAC GCGCTCGACC GCGCAGGCGT GCCGTGGCGC
GTCGCGTTCA CGACGCCGAG CCTGGCCGGG CTGTGGGCCG CGGCGTCAGC CGGCCTCGGG
CTGACGGTGC GCTCGCATTA TGGGTTGCCC GCGTCGGTGC GCGTGCTCGA CGCGGCGTCG
TTCGGGCTGC CCGAACTGCC GAGCCTGCCG CTGATGCTGC TGCGGCGGAC GTCGTCGGCG
ACGCCGACCG TCGAACGGCT CGCGCGGATC GTCGCGCAGG CGGTGCGGGA CGCGACGCAG
GCAGAGGTGG CGATGCTTGC GGCGTAA
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| Protein sequence | MSGQHNAHGA TPLAAPDAAL ARPNFDVAAL RSLVAGVDLG SFAKAADRVA RSSSAVSAQI
RKLEEQAGTP LFVKAGRGLA LTDAGDAMLR YARRMIELND EAAAAVRGVN LDGWVRVGLQ
EDFGEAILPD VLGRFARAHP KVRIEARVAR NAELLERLDA NQLDLALVWG DPASATLVSR
AGIDSDAIAQ VPMQWIAAVG AAGLGMSDGG GPADAADDGD ASLRVMRASG EPLPLVVFDR
PCRFFGAATD ALDRAGVPWR VAFTTPSLAG LWAAASAGLG LTVRSHYGLP ASVRVLDAAS
FGLPELPSLP LMLLRRTSSA TPTVERLARI VAQAVRDATQ AEVAMLAA
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