| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2685 |
|---|
| Symbol | |
|---|
| ID | 6177281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2983642 |
|---|
| End bp | 2984865 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641682461 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase I |
|---|
| Protein accession | YP_001809378 |
|---|
| Protein GI | 172061726 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.333907 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACCTC TGCTGCTCTC GCACTTCACC GCCACCAGCT GCATCGGCCG CGGCCTCGGC
GCGACCCTCG ACGCGCTGCG CCACGCGCGC GGCGCGCTCA CGCCGTGCGA CTTCGAACGC
GCCGAACTCG ACACGTGGAT CGGCTCGGTG GACGGCGTCG ATGCGCAGCC CGTGCGCGCG
GATCTCGCCG ACTTCGACTG CCGCAACAAC CGCCTCGCGC AGCTCGGCCT CGTTCAGGAT
GGCTTCGACG CGCGCGTCGC CGCGGCCGTA TCGCGCCATG GCGCCGCACG CGTCGGCGTG
TTCATCGGCA CGAGCACGTC CGGCATCCTC GAGACCGAAC GCGCGTACGA GCAACGCGAT
CCGGCGAGCG GCGCACTGCC CGCCGGGTTC CGCTATGCGC ACACCCACAA CCCGTATTCG
CCGGCCGCAT TCGTACGCGC GTATTTCGGG CTGCGCGGGC CGGCGATGGC GATCTCGTCC
GCGTGTTCGT CCGGCGCGAA GGTATTCGGC TCCGCGCGCC GGATGATCGA AGCGGGGCTG
ATCGATGCGG CCGTCGTCGG CGGCGTCGAT TCGCTGTGCC TGACGACGCT GTACGGCTTC
AATTCGCTCG AACTGTTGTC GCGCCAGCCG TGCCGGCCGT TCGACGTCGC GCGCGACGGC
ATCTCGATCG GCGAGGCCGC CGCGTTCGCG CTGCTCGAAC GCGTGCCGGA CGCACGCACC
GCGCTCGATG ACGACGCGAT CCTGCTGCTC GGCGTCGGCG AATCGAGCGA TGCGCATCAC
ATGTCGTCGC CGCATCCGGA CGGCCTCGGC GCGCGCGTCG CGATCGAACA GGCGCTCGCA
TCGGCCGGCC TCAATGCGAG CGACATCGAC TACGTGAACC TGCACGGCAC CGCGACGCCC
AGCAACGACG CCGCCGAAAG CCGCGCGGTG GGCGCACTGC TCGCGCGCAC GCCGTGCAGC
TCGACGAAGG GGGCGACCGG TCACACGCTC GGCGCCGCCG GCGCGCTCGA AGCCGTCGTC
GCCGCGCTCG CGCTGCGCGA GCAGTTCGTG CCGGCCGGCG TCAACACGAC GCAACCCGAC
CCGGCGCTGG CCGCCGACTA CGTGCTCGCG AGCCGCGACG CACACCTGCG TGCGGTGCTG
TCCAATTCGT TCGGCTTCGG CGGCACGAAT TGCAGCCTGA TCCTCGGCCG CGCCGAGCAC
GCCCGCCGCC GGGAGCCGAC ATGA
|
|---|
| Protein sequence | MKPLLLSHFT ATSCIGRGLG ATLDALRHAR GALTPCDFER AELDTWIGSV DGVDAQPVRA
DLADFDCRNN RLAQLGLVQD GFDARVAAAV SRHGAARVGV FIGTSTSGIL ETERAYEQRD
PASGALPAGF RYAHTHNPYS PAAFVRAYFG LRGPAMAISS ACSSGAKVFG SARRMIEAGL
IDAAVVGGVD SLCLTTLYGF NSLELLSRQP CRPFDVARDG ISIGEAAAFA LLERVPDART
ALDDDAILLL GVGESSDAHH MSSPHPDGLG ARVAIEQALA SAGLNASDID YVNLHGTATP
SNDAAESRAV GALLARTPCS STKGATGHTL GAAGALEAVV AALALREQFV PAGVNTTQPD
PALAADYVLA SRDAHLRAVL SNSFGFGGTN CSLILGRAEH ARRREPT
|
|---|
| |