Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2662 |
Symbol | |
ID | 6179025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2957171 |
End bp | 2958766 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641682438 |
Product | major facilitator transporter |
Protein accession | YP_001809355 |
Protein GI | 172061703 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTCC ATACTGCCGC CCACCATTCG AGCGGGCAAG TCCTGCCGTT CCGCGAATCG CTGCTGGCGA TGATCGGGAT CTCGTTCGTC ACCATGCTCG TCGCGCTCGA CCAGACGGTC GTCGGCACCG CGTTGCCGAC CATCGTCGCC GAACTCAGGG GCTTCGACCT GTACGCGTGG GTGGCGACCT CGTATCTGCT CAGTTCCGTC ATCACCGTGC CGGTCTTCGG CCGCCTCGGC GACTATTACG GCCGAAAGCC GTTCGTCATC GCGTCGATCG TCGTGTTCAC CGGCGCATCG GTGCTGTGCG GAATGGCGAA CGACATGCTG TACCTGGTGC TCGCGCGCGG GCTGCAGGGG ATCGGCGGCG GGATGCTGGT CGGCACCGCG TTCGCTTGCA TTCCCGACCT GTTCCCCGAT TCCGTCGTGC GGCTGCGCTG GCAGGTGCTG ATGAGTTCCG CGTTCGGCAT CGCGAACGCG GTCGGGCCGT CGCTCGGCGG GATCCTGACG CAATCGTTCG GCTGGCGCTC GGTGTTCTAC GTGAACCTGC CGGTCGGCCT GCTTTCGCTG TTCTTCGTGT GGCGCTACTT GCCGCACCTG CGGCATGTCG AGCACGACCG CAAGATGCGC CTCGACTGGC CGGGCGCGCT GCTGATCGCG CTGTCGCTCG GCGCGCTGCA GCTGTTCGTC GAATGGCTGC CGAAGTACGG CGTCACGAGC TGGGCGTCGC TGCTGCTGTT CGTCGCGGTC GGCGCCGGTA TCGGGCTGTG GCATTGGGAA AAGCGCTGCG CGCAGCCGAT CCTGCCGTTC GACATGTTCG GCAACCGCGC GCTGTCCGCG CTGTTCGTGC TCGCGATCCT CGCCGGCTTC TCGATGTTCT CGCTGCTGTT CTACGCGCCG CTGCTGTTCC AGGGCGGCTT CGGGATGTCG CCGAAGGAGG CGGGGCTCGT GATCACGCCG CTCGTCGTGT TCATCACGAT CGGCAGCATC ATGAACGGCC GCGTCATCAC GCGCATCCGC CATCCGAACG CGATGCTGCA GGTCGGTTTC GTGCTGTTCG CGATCGCGTG CGCGGGCATC GTCGTGTCGA CCCACGCGAC GCCGACCTGG ATGCTGATGG CGCTGATGGT CGCCGGCGGC ATCGGTCTCG GTTTCGTGCT GCCCAACCTT ACCGTGTTCG CGCAGCAGAC GGCCGGCCGC GAGCACCTTG GCATCGCGAC CGCGCTGCTG CAGTCGCTGC GGATGGTCGG CGGGATGCTC GGCACGGCGC TGACGGGCAC GCTCGTCAAC CAGATGTATT CGAGCGGCGT GCGCGATGCG CTGTCGGGCG ACCACGCGCT GCAATGGCAT GCGCGGCTCG CCGATCCGCA GATCCTGATC GACCGCGCCG CGCAAGGCGG TCTCGTCGCG GAGCTGACCC GCGCCGGGCA TAATGGCGCG CTGCTGCTGG AAGCGGCCCG CGAATCGCTG GTTGGCGCGA TTCACCTGGG TGTCGCGATG GCGGCCGTCG TCGCCGTGGT GTCGGTGTGG CAGTGCCGCC GCGTGCCGCC GATCGCGCTG CGGCGCAAGA TCGAGCCGCA TGTCGCGGCC GATTGA
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Protein sequence | MAVHTAAHHS SGQVLPFRES LLAMIGISFV TMLVALDQTV VGTALPTIVA ELRGFDLYAW VATSYLLSSV ITVPVFGRLG DYYGRKPFVI ASIVVFTGAS VLCGMANDML YLVLARGLQG IGGGMLVGTA FACIPDLFPD SVVRLRWQVL MSSAFGIANA VGPSLGGILT QSFGWRSVFY VNLPVGLLSL FFVWRYLPHL RHVEHDRKMR LDWPGALLIA LSLGALQLFV EWLPKYGVTS WASLLLFVAV GAGIGLWHWE KRCAQPILPF DMFGNRALSA LFVLAILAGF SMFSLLFYAP LLFQGGFGMS PKEAGLVITP LVVFITIGSI MNGRVITRIR HPNAMLQVGF VLFAIACAGI VVSTHATPTW MLMALMVAGG IGLGFVLPNL TVFAQQTAGR EHLGIATALL QSLRMVGGML GTALTGTLVN QMYSSGVRDA LSGDHALQWH ARLADPQILI DRAAQGGLVA ELTRAGHNGA LLLEAARESL VGAIHLGVAM AAVVAVVSVW QCRRVPPIAL RRKIEPHVAA D
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