Gene BamMC406_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2540 
Symbol 
ID6178771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2821416 
End bp2822330 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID641682315 
Productfatty acid hydroxylase 
Protein accessionYP_001809233 
Protein GI172061581 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.371452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCG ACGTCGAATT GCTTCTGCTC GCGCTGGCGC CCGTCTTCCT GCTCTGCATC 
GCGTGGGAGG CCTGGCACCT CGCCCGCACG CGTGCGCACG AGCATGTCTA TGCGTGGCGC
GACACGCTGT GCAACGCGGT GCTCGCGCTG ATGCACCAGG GCGCCGACAA GCTCGCGTGG
CTGTTCGTGA TCCCCGTTTA TGCGTACTGC TACGCACATT TCCGGCTGTT CACGTGGCAC
GACGGCTGGC TGTCGTTCGC CGTGCTGTTC ATCGGCCAGG ACTTCCTCTA CTACGTGTTC
CATCGCGCGA GCCATCGCGT GCGCTGGCTG TGGGCCGCGC ACGTCGTGCA CCACTCGTCC
GAGCGGATGA ATTTCTCGAC CGCGTTCCGG CAGAGCCTGA TGTATCCCGT CGCGGGCATG
TGGGTGTTCT GGCTGCCGCT CGCGTTCGTC GGCTTTCCGC CGCAGCAGAT CGTCGGCGTC
GTGCTGATCA ACCTCGCGTT CCAGTTCTTC GTGCACACGC AGGCGATCGG CAAGCTCGGC
TGGCTCGAAT ACGTGTTCAA CACGCCGTCG ATCCATCGCG CGCACCATGC CCGCAACCCG
CGCTACATCG ACCGCAATTA CGCAGGTGTG CTCGTGATCT GGGATCGCCT GTTCGGCAGC
TACGTCGAGG AGTCGCCCGA CGATCCGCCG CGCTATGGAA TCGTCGAGCC GCTCGGCTCG
AACAACCCGC TCGTCGCGAC GTTCCACGAG TGGGTGTCGA TGGCGGCCGA CGCGTTGCGC
ATCGACGGCT GGCGCAACAA GCTGCACGCG ATTTTCGGCC CGCCCGAATG GGCGAGCGCT
TATCATGCGC AGATTGCAGA GGCCGCGAAC CAGGATCCGC GCGCCGTGCC GCTTGCGGCT
GCGCGTGACC AATAA
 
Protein sequence
MRFDVELLLL ALAPVFLLCI AWEAWHLART RAHEHVYAWR DTLCNAVLAL MHQGADKLAW 
LFVIPVYAYC YAHFRLFTWH DGWLSFAVLF IGQDFLYYVF HRASHRVRWL WAAHVVHHSS
ERMNFSTAFR QSLMYPVAGM WVFWLPLAFV GFPPQQIVGV VLINLAFQFF VHTQAIGKLG
WLEYVFNTPS IHRAHHARNP RYIDRNYAGV LVIWDRLFGS YVEESPDDPP RYGIVEPLGS
NNPLVATFHE WVSMAADALR IDGWRNKLHA IFGPPEWASA YHAQIAEAAN QDPRAVPLAA
ARDQ