| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2367 |
|---|
| Symbol | |
|---|
| ID | 6178537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2637711 |
|---|
| End bp | 2638295 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641682141 |
|---|
| Product | alpha-ribazole phosphatase |
|---|
| Protein accession | YP_001809061 |
|---|
| Protein GI | 172061409 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0406] Fructose-2,6-bisphosphatase |
|---|
| TIGRFAM ID | [TIGR03162] alpha-ribazole phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCG TCCTGATTCG CCATCCGGCC GTCGATGTCG AGCCGGGCGT GTGTTACGGA
TGCAGCGACG TGCCGCTCGC CGCGTCGGCC GACGCGGGCG CGCGGGCCGT GCGCGAACGT
CTGGCGGCGC TTGGGGCGCC GTTGCCCGAG CAGGTCTGGA CGAGCCCGCT GATACGCTGC
GCGTCGGTCG CCGAGCGGCT CGCGCAGGAG TTGGACGTGC CGCTGCGGCG CGACGCAGGC
TGGCAGGAAA TGGACTTCGG CGCGTGGGAG CTGCAGCGCT GGGACGATAT CGACCGCGCC
GCGCTCGATG CGTGGGCGGC CGACCTGATG CATGCGTGCG CGCATGGCGG CGAAAGCGTT
GCACGGTTCG CCGAGCGTGT CGCGCGGACT GCGGACGCGG TCGCGCCGAC CGACGCGCCG
CAATGGGTAC TTACGCATGC AGGCGTGATT CGCGTGCTCG CCGCGCACGC GTTGCGTGTG
CCGCTCGATA CGCTGCTGTC GCGACCGGTG CCGACGGCCG GCGTCGTATG GTTGCGCTTG
GATGATGCCG CGCGCACGTG GGAAGTCGTC CACTGGGACG CGTAG
|
|---|
| Protein sequence | MDLVLIRHPA VDVEPGVCYG CSDVPLAASA DAGARAVRER LAALGAPLPE QVWTSPLIRC
ASVAERLAQE LDVPLRRDAG WQEMDFGAWE LQRWDDIDRA ALDAWAADLM HACAHGGESV
ARFAERVART ADAVAPTDAP QWVLTHAGVI RVLAAHALRV PLDTLLSRPV PTAGVVWLRL
DDAARTWEVV HWDA
|
|---|
| |