Gene BamMC406_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2260 
Symbol 
ID6176090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp2518937 
End bp2519212 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content62% 
IMG OID641682033 
ProductXRE family transcriptional regulator 
Protein accessionYP_001808955 
Protein GI172061303 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.237375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.775485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATG CCGACGAAAT GCGAGTGAAG GCTCAACTCG CCGCGAAGAT CGCGGAGATC 
ATCAAGGCGC GCAAATGGAC GCAGCAGCAC GCGGCCCGGC TGCTCGGCAT GACGCAGCCG
AAGCTGTCGA ACATGCTGCG CGGGCAGTTT CGCGGCGTCA GCGAAACGAA GATGCTCGAA
TGTCTGGCGA AGCTCGGACG CGACGTGCAA ATTGTCGTCG GACCGGATCG TCAGTCGGAC
GTCGAAGGGC ATATCGAAGT CGTATTCGCC GCCTGA
 
Protein sequence
MRDADEMRVK AQLAAKIAEI IKARKWTQQH AARLLGMTQP KLSNMLRGQF RGVSETKMLE 
CLAKLGRDVQ IVVGPDRQSD VEGHIEVVFA A