| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2239 |
|---|
| Symbol | |
|---|
| ID | 6177844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 2494332 |
|---|
| End bp | 2494877 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641682012 |
|---|
| Product | protein of unknown function DUF306 Meta and HslJ |
|---|
| Protein accession | YP_001808934 |
|---|
| Protein GI | 172061282 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3187] Heat shock protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.393899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACT TGTCCGCCGC CGCACGCGCA CGCACCGGTC TGCTTCGCCC GTTGCGAGCG
CCGCTCTGCG CGTTGACGCT TGCCACGCTT CTCGCCGCCT GCGCGATGCC GACCCACCCC
GATTCCGCCG CCCCCGCACC CGACCCGTAC AACCCGGCCG CCGTCCAGCT GCTCGACGAC
ACGAGCTGGG AGCTCACGAG CTGGCTGAAC GCCGACGGCA CGTCGCGCAC GATTCCGCAC
GGCGACAACG GTGAGCCGAT CAAGCTCGCG CTGTCCACCG AATCGGGCGT GCGGCGCGCC
AGCGGCTTTT CGGGCTGCAA CCGTTACATG GGCACCTATG CGCTCAAGAA CGGCCTGCTG
AACTTCGGAC CGCTCGCCGG CACGCGCATG GCGTGCCCGA ACGCGCTCGG CGGCCAGCTC
GAGCACGCTT ACCTCGATGC GCTCGCGCAC ATCGAAAAGA CCGGCGTGCA GATGCGCGAG
CCGCAGCAAC TGCAGATCGT GACCGAAGCC GGCGCGACGC TGACCTTCAC GCGCCGGAGC
CCCTGA
|
|---|
| Protein sequence | MSHLSAAARA RTGLLRPLRA PLCALTLATL LAACAMPTHP DSAAPAPDPY NPAAVQLLDD
TSWELTSWLN ADGTSRTIPH GDNGEPIKLA LSTESGVRRA SGFSGCNRYM GTYALKNGLL
NFGPLAGTRM ACPNALGGQL EHAYLDALAH IEKTGVQMRE PQQLQIVTEA GATLTFTRRS
P
|
|---|
| |