| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2229 |
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| Symbol | |
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| ID | 6178077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2480243 |
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| End bp | 2481523 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682002 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001808924 |
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| Protein GI | 172061272 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.541391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCGT TTTCCGCTCC CGCCACGCGG CGCCTGACCG CCGCCCGCGC CTTCGCCGTC
ATCGCGCTCT GCATGGTGCC CGTCTCGACC GCGCTGACCA ACGTGTTCTG CGGGCTGTTC
GCCGCCGCGC TCGTGATCTC CCCCGAATTC TGGCGCGACC TGCGCTCGTT CGTCACCGAC
CCGGCGGCGC TCGCCGCGCT GCTGATCCTC GCGGCGCTGA CCGCGAGCGT CACCTATACC
GTCGCGCCGC ATCCGAAGGC GTGGAACTGG ATCGGCAAGT ACGACAAGCT GCTGCTGCTG
CCGTTTGCGG TGCTCGCGTT CCGCCATTCG AACTGGGCGC CGATCGTGCG GCGCGCGTGG
TTCGGCACGC TGTGCGTGAT CCTGTTGCTG TCGACCACCA ACTATCTCGG CCTGACCGCG
ATCGGGCCCG CGCATGCGAG CGACCTGCCG CTGTCGCGCG CGTGGGTGTT CAAGAACCAC
ATCGCGGCCG GCATGTTCGG CGCGCTGCTG TTCTATCAGG CCGCCGACCT CGCGCTGTCG
GCCCGCACCG CGCTGTCGCG CGCCGCGTAT GGCGCCGTCG CCGCCTGGTC GTTGATCAAC
GTGTTCGTGA TGCTGCAGGG GCGCACCGGG CAGGTCATCG CGCTGCTGCT GATCCTCGTC
GTCGCGGTGC GTTTCGTGTT GCTGCTGCGC CGCCAGTCGG CACTGCGCGC AACCCTCGCC
GCCGGAACGC TGGTGCTGGC CGGCGTCGCG CTGGTCGCTG CCGCGTGCAC GATGCAAAAC
GGCCGCCTCG TGAAGGTCGT GACGGAAGTG CAGCAGTATC GGCAGACCGA TGCGGCCACG
TCGACCGGGC TGCGTCTCGA GTGGTACAAG AAGGGGCTCG AGCTGTATCG CATGCGCCCC
GTGATCGGCT ATGGCGCGGG CGGTCTCGAA TTCGAGTTCC AGAAGCTCAC GGCAGGCAAG
ACGGCCGCCG AAGGCCAGCT CACGTCGAAC CCGCATAACG AATACCTGCT GATGGCCGTG
CAGCTCGGCA CGCTCGGGGT CCTGCTGTTC GTGAACCTGA TCGTGCAGAT TGCACGCGGC
AGCCGCGCGC TCGACCCGCG TTCGCAGCAC TTGCTGCTCG CATGGCTCGC GATCTTCGCG
ATCGGCAGCC TCGCGAATTC GCTGCTGCTC GATTTCGCCG AAGGCCACCT GCTGGTGCTG
CTCGCCGGCA TCCTGCTCGG CTGCGCCGAG CGCGGCGAAG CGCTGCCGCG CGAGACGTCG
GCGATCCGGC GCAGCGCGTA A
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| Protein sequence | MLSFSAPATR RLTAARAFAV IALCMVPVST ALTNVFCGLF AAALVISPEF WRDLRSFVTD
PAALAALLIL AALTASVTYT VAPHPKAWNW IGKYDKLLLL PFAVLAFRHS NWAPIVRRAW
FGTLCVILLL STTNYLGLTA IGPAHASDLP LSRAWVFKNH IAAGMFGALL FYQAADLALS
ARTALSRAAY GAVAAWSLIN VFVMLQGRTG QVIALLLILV VAVRFVLLLR RQSALRATLA
AGTLVLAGVA LVAAACTMQN GRLVKVVTEV QQYRQTDAAT STGLRLEWYK KGLELYRMRP
VIGYGAGGLE FEFQKLTAGK TAAEGQLTSN PHNEYLLMAV QLGTLGVLLF VNLIVQIARG
SRALDPRSQH LLLAWLAIFA IGSLANSLLL DFAEGHLLVL LAGILLGCAE RGEALPRETS
AIRRSA
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