| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1834 |
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| Symbol | |
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| ID | 6176609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2043173 |
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| End bp | 2044717 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641681591 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001808533 |
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| Protein GI | 172060881 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.431343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATA CCCGCCCGCT TCCCGACTCC GCCCCGCTCG CGCTGCTGCG CGTCGCCGAC
CTGCGCGCGG CCGAGGCCGC CGCAACCGCC GAACTGCCGC CGCACACGCT GATGGGCCGC
GCGGGCGCCG CCGCCGCGCG CTGGCTGTCC GAGCGGGTCG CCGGCGACGA ACGGCCGGTC
TGGTTCGCGG TCGGCCCGGG CAACAACGGC GGCGACGCGC TGGTGGCCGC CGCGCAGCTG
CAGCAGCTCG GCGTCGCCAC GCAGGCGTGG ATGCCGGTCG CGGTCAAGCC GGACGATGCG
CAATGGGCGC TCGGGCTCGC GCGCGCGGCC GGCGTGCCGC TGTCGACCGA ACCGCCCGCG
TCGCTGGACG ATTACGCGTG GGTCGTCGAC GGACTGTTCG GCATCGGCCT CGGTCGCGCA
CTCGACGGCC CGTTCGCCGT CCAGGCCGCG CGCATCGCCG CGCACACACG AAACGGCGGC
CGCGTGCTCG CGCTCGACGT GCCGAGCGGA CTGGACAGCG ACACGGGCCG GATCGTCGGC
GCGGGCGTCG CCGTCGCCGC GACCCATACG CTCACCTTCA TCGGCGCGAA GCCGGGCCTT
TACACGGGCG ACGGCCGCGA TCTCGCCGGC GAGATTCACA TCGCGTCGCT CGACGTCGCA
CCGCCCGCCG CGCCGGCCGT CGTGCTGAAT GCGCCGGCCC GGTTCGCGGC CGCGCTGCCC
GCCCGCGCGT TCGCGTCGCA CAAGGGCACG TTCGGCAGCC TGGCGGTGCT CGGCGGCGAC
ACCGGCATGT GCGGCGCGCC GATCCTCGCC GCGCGTGCCG CGCTGTTCGC GGGGGCCGGC
AAGGTGCATG TCGGCTTCCT CGGCGCCGGC GCGCCGCCGT ACGACCCGCC GTTTCCCGAG
CTGATGCTGC ATCCGGCAGA CAGCCTCGAC CTCGATGCGA TGTCCGCGAT CGCGGCAGGC
TGCGGCCTCG GCACGCGCGA GGCCGCGGCA ACCCTCGTGC GTGACGTGCT CGCGCACGAC
GCCGTGACGC TGCTCGACGC CGACGCGCTG AACCTCGTCG CGACCCACCC CGAGCTCGCG
ACCGCCGTTG CCGCCCGCGG CGCGCGCGGC CTTGCGTGCG TGCTGACGCC GCATCCGCTC
GAGGCGGCGC GGCTGCTCGG CAGCGATACC GCGACGGTGC AGCACGATCG ACTGGCCGCG
GCGCAGGCGC TTGCCGCGCG CTACGCGAGC GTCGTCGTGC TGAAGGGTTC GGGCACGGTG
ATTGCCGCGC CCGACGGCCG CCTGACGGTC AACCCGACCG GCAACGCCGC GCTCGCGACC
GGCGGCACCG GCGACGTGCT CGGCGGCCTG ATCGGCGCGC TGCTCGCGCA GCGCGTCGCG
CCGTACGAAG CCGCGCTCGC GGGCGTGTAT CTGCACGGCC TCGCCGCCGA CACATTGACC
GCGAACGGCA CGGGCCCGGC CGGCCTCGTC GCGGGCGAAC TCGCGCCGAT GGTGCGCACG
CTGATCAATC GCCTTTTTTA CCCGTCGCCG CGCGCCGACA TATAA
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| Protein sequence | MTNTRPLPDS APLALLRVAD LRAAEAAATA ELPPHTLMGR AGAAAARWLS ERVAGDERPV
WFAVGPGNNG GDALVAAAQL QQLGVATQAW MPVAVKPDDA QWALGLARAA GVPLSTEPPA
SLDDYAWVVD GLFGIGLGRA LDGPFAVQAA RIAAHTRNGG RVLALDVPSG LDSDTGRIVG
AGVAVAATHT LTFIGAKPGL YTGDGRDLAG EIHIASLDVA PPAAPAVVLN APARFAAALP
ARAFASHKGT FGSLAVLGGD TGMCGAPILA ARAALFAGAG KVHVGFLGAG APPYDPPFPE
LMLHPADSLD LDAMSAIAAG CGLGTREAAA TLVRDVLAHD AVTLLDADAL NLVATHPELA
TAVAARGARG LACVLTPHPL EAARLLGSDT ATVQHDRLAA AQALAARYAS VVVLKGSGTV
IAAPDGRLTV NPTGNAALAT GGTGDVLGGL IGALLAQRVA PYEAALAGVY LHGLAADTLT
ANGTGPAGLV AGELAPMVRT LINRLFYPSP RADI
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