Gene BamMC406_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1802 
Symboltmk 
ID6176969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand- 
Start bp2007926 
End bp2008546 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content70% 
IMG OID641681561 
Productthymidylate kinase 
Protein accessionYP_001808503 
Protein GI172060851 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0698629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG GTAAATTCAT CACGTTCGAA GGCATCGACG GGGCGGGGAA GACCACCCAC 
CTGCAATGGT TCTGCGAACG CCTCCAGGCG AAGCTGGCCG CGGGCGGCCG GCAGGTCGTC 
GTCACCCGCG AGCCGGGCGG CACGCAGCTC GGCGAGAAGC TGCGCGAGAT CCTGTTGAAC 
CAGCCGATGG ACCTGGAGAC CGAAGCACTG CTGATGTTCG CGGCCCGGCG CGAACACCTC 
GCGCTCGTGA TCGAGCCCGC GCTCGCGCGC GGCGACTGGG TCGTGTCCGA TCGCTTCACC 
GACGCGACGT TCGCGTACCA GGGCGGCGGC CGCGGGTTGC CGCGCGACAA GCTGGAGACG 
CTCGAGCGCT GGGTGCAGGG CGGCTTCCAG CCCGACCTGA CGGTGCTGTT CGACGTCGCG 
CCGCAGGTGG CGAGCGAGCG CCGCGGCGCC GTGCGCATGC CCGACAAGTT CGAAAGCGAG 
TCGGACGCGT TTTTCTCGCG CACCCGCGGC GAATACCTGC GGCGCGCGGA AGAGGCGCCG 
CACCGCTTCG CGATCGTCGA CGCGACGCAG TCGATTCCCG AGATCCGCCA GCAGCTCGAA 
CGCGTGCTCG CCGCGCTGTA A
 
Protein sequence
MASGKFITFE GIDGAGKTTH LQWFCERLQA KLAAGGRQVV VTREPGGTQL GEKLREILLN 
QPMDLETEAL LMFAARREHL ALVIEPALAR GDWVVSDRFT DATFAYQGGG RGLPRDKLET 
LERWVQGGFQ PDLTVLFDVA PQVASERRGA VRMPDKFESE SDAFFSRTRG EYLRRAEEAP 
HRFAIVDATQ SIPEIRQQLE RVLAAL