| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1626 |
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| Symbol | |
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| ID | 6176428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1825953 |
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| End bp | 1827410 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681387 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001808329 |
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| Protein GI | 172060677 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.408436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.668079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCC AATCCCTCGA CCTTGGCGGC ACCGCGGACG GACCCGCGTC CGCCGTACCG
CCCGCGGCCC GGGCCGGCGC CGATGCGACG GCCCTGCCCG CCCGCGCCAT CACGCTCGGC
GAATTCATGG ACGATCTGCC GGTCGGTGCG CTGCACCGGT TCGTCGTCTG GGTGATCGGC
ATCGGGCTGT TCTTCGACAT GTACGAGATC TTCCTCGTCA GCACGATCGG TTCCGCGTTG
CAGAACGAAT ACGGGCTGAG CCGGCAAAGC GCCGATTTCA AGCTGCTGCT GGCCTCGGCA
TTCATCGGGA TGTTCGTCGG CGCGATGTGT CTCGGCAGCC TCGCCGACCG CATCGGACGG
CGCAAGGCGT TCCTGATGAC GCTCGTCTGG TACAGCGCGT TTTCGCTGAT CGGCGCGTTC
TCGGTGAATG CCGACATGCT GGTGGCATGC CGGTTCCTGA CGGGCATCGG TGTCGGTGCA
ATCTACCCGG TCGCCGACAG CTTCCTGTCG GAAATCCTGC CGAAGGAAAA GCGCGGGCGG
CTCGCCGCCT GGGCCTATAC GACTTCTTAC GTCGCGGTGC CGCTGGTCGG TTTCCTCGCG
CTCTGGCTGA ACCCGCTTCA CGTCGCGGGC GTGGCCGGCT GGCGCATCAT TCTCGCGATC
GGTAGTCTGG GTGCCGTATA CGTGCTGTTG ATCCAGCACC GGCTGCCGGA GAGCCCGCGC
TGGCTGCTCG CGCAGGGCCG CACGGCGGAG GCGCATGCCG CGGCGCGGCG CTTCGCGCAG
AGCGCCGGCG TGCGCGTGCC CGAGCAGTTC GCGGCGTCGG CCGAACCGCA GCGGCCGCTG
AGTCTCGGCG AGCGCATCGC GCTGCTGCGC CGCCGGCCCT ACCGCGCGCG CTACCTGATG
CTCGCGGTGT TCCACCTGCT CCAGGGCTTC GGCTATTACG GCTTCGGCAC GCTCGCGGGC
ACGGTCGTCA AGAGCCGCGG TTTCGACGTG ACGGACAGCA CGCTGTTCAT TGCGCTGTCG
TTCATCGGTT ATCCGATCGG CTCGCTGCTG TCGATTCCGC TGCTGAACTG GATCGAGCGA
CGCACGCTCG TGATCGTGTC GATCCTGTCG ATCGCCGCGT TCGGGCTGTG CTTCGCGTAT
TCGGGCAATA CGGCGCTGAT CGTCTGCTTT GGTTTTCTGA CGACCTGCGC GTCGAACGTG
TTCAGCAACG CCTATCACGT GTACCAGGCG GAGATTTTCC CGGCGCGCGT ACGGTCGACC
GCGATCGGCA GCACGTACGC ACTGTCGCGC ATCGTCAGCG GCGCGCTGCC GTTCGTGCTG
CTGCCGGTGC TGGCCGCACA CGGCGCGGGT GCGATGTTCG GCGTGATCTC GGTCGCGCTC
GGCATCGTCG CCGTCACGTT GCGCGTGCTC GGGCCGCTGA CCACGCGGCG CAGCCAGGAC
GACATCAACC CGGTATGA
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| Protein sequence | MNSQSLDLGG TADGPASAVP PAARAGADAT ALPARAITLG EFMDDLPVGA LHRFVVWVIG
IGLFFDMYEI FLVSTIGSAL QNEYGLSRQS ADFKLLLASA FIGMFVGAMC LGSLADRIGR
RKAFLMTLVW YSAFSLIGAF SVNADMLVAC RFLTGIGVGA IYPVADSFLS EILPKEKRGR
LAAWAYTTSY VAVPLVGFLA LWLNPLHVAG VAGWRIILAI GSLGAVYVLL IQHRLPESPR
WLLAQGRTAE AHAAARRFAQ SAGVRVPEQF AASAEPQRPL SLGERIALLR RRPYRARYLM
LAVFHLLQGF GYYGFGTLAG TVVKSRGFDV TDSTLFIALS FIGYPIGSLL SIPLLNWIER
RTLVIVSILS IAAFGLCFAY SGNTALIVCF GFLTTCASNV FSNAYHVYQA EIFPARVRST
AIGSTYALSR IVSGALPFVL LPVLAAHGAG AMFGVISVAL GIVAVTLRVL GPLTTRRSQD
DINPV
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