| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1615 |
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| Symbol | |
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| ID | 6177090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1811667 |
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| End bp | 1812902 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681376 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001808318 |
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| Protein GI | 172060666 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.308041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGA GCGTGTCTGT CGCACGGATG TGTTCGGGTA CCTTGTCTTC GAACGTGTTG
CAGGGGCTTG CCCGTCACGG CTACCGACGC GCGCTTGCCC TCATCGCATG CTGCACCGCG
ATGGCCGGGT CCGCCGCCTG CATCGCGGCG GAGCCGGGCG TGAGCGCCGA CACGATCCGC
CTGGGCATGG TCAACGCGCA GTCGGGCAAT TCCGCCGGGC TCGGACGCGG GCTGCTGATG
GGTGCGCAGG CCGTATTCGA CGATGTGAAC GCGCACGGCG GCGTGCACGG CAGGAAGATC
GAGCTCGTGG TCGCGGACGA TCGCTACGAA CCCGAGCGGA CCGTCGACGA CACGCTGGAG
ATGATCGAGC GGCGCAACGT GCTGGCGCTG TTCGGCTATG TGGGCACGCC GACGACCACC
GCGGTGCTGC CGATCATCCG GGACGCCGGC ATTCCGCTCG TCGGCACGTT CAGCGGCGCG
ATGGCGCTGC GCAGGCCGGT CACGCCGGAG GTATTCAACA TCCGCGCGAG CTACGAAGAC
GAAACGCGCG CACTGGTCGA GCGTTTGCTC GCGCACGACC ACGCCAGGCG ATTCGCGGTG
TTCTACCAGG ACGACGGCTT CGGGCTCGCG GTGCTGGCGG GCACGCGGCT CGCGCTGCAG
CGCCATGGCC TCGATGTGGT CGCGACGGGA ACGTTCCGCC GCGGCACCAC GGCCGTCGAC
ACCGGCCTGG CGGCCGTGCT CGAAGGGCGG CCGGACGTCG TGATCATGGT CGGCCCGTAT
ACGCCGGTGG CCGCGTTCAT TCGCGCGGCG CACCGCGAAG GGCTGAACGC GCGGCTCGCG
GCGGTGTCGT TCGTCGGCAC CGACGACTTG CTGCGCCTGC TCGGCGAAGA AGGAAACGGC
ACGCTGATCT CGCAGGTCGT GCCGCTTCCG CAGAACGAGC GCCCCGTCAT CCGCGACTGC
GTCCGTCTGA TCGAGCAACG CTTTCCGGGC GAACGGGCAG GTGTGGTGCA CATCGAGGGC
TGCCTCGACG CGAAGATCGC GCTGATCGGG CTGGAGCGCG CGGGCCCGGC GCCGACCCGC
GCAACGCTGA AGCAGGCGCT CGAATCGATC CGGCATGTCG ACCTGGGCGG CCTGGTGGCC
GACCTGAATG CCGACGATCA TCAGGCGTTC GACGACGTGT TCCTCACCGA AATCGCACAC
GGCCGCGTCA CGCCGCTCGA CGCACCGGCC AGATAA
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| Protein sequence | MDESVSVARM CSGTLSSNVL QGLARHGYRR ALALIACCTA MAGSAACIAA EPGVSADTIR
LGMVNAQSGN SAGLGRGLLM GAQAVFDDVN AHGGVHGRKI ELVVADDRYE PERTVDDTLE
MIERRNVLAL FGYVGTPTTT AVLPIIRDAG IPLVGTFSGA MALRRPVTPE VFNIRASYED
ETRALVERLL AHDHARRFAV FYQDDGFGLA VLAGTRLALQ RHGLDVVATG TFRRGTTAVD
TGLAAVLEGR PDVVIMVGPY TPVAAFIRAA HREGLNARLA AVSFVGTDDL LRLLGEEGNG
TLISQVVPLP QNERPVIRDC VRLIEQRFPG ERAGVVHIEG CLDAKIALIG LERAGPAPTR
ATLKQALESI RHVDLGGLVA DLNADDHQAF DDVFLTEIAH GRVTPLDAPA R
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