| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1612 |
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| Symbol | |
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| ID | 6177255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1808614 |
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| End bp | 1809537 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681373 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001808315 |
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| Protein GI | 172060663 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.142547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCG ACGATCATGC CGCGCCGACC TGGCCGCCGA AGCAAGGCGC GCCCGATGCG
CGCCCCGTCA ACGCGAGGAC ACCGCAGAAG ATGAGAAGCG ACCTCGCCGG CCGGGCATGG
AAGGCCCTCG TGTGGGGGCT GATGGCGTTC TTCCTGCTGA ACGTGATGCT GCTGATCGCG
ACCGTCGCGG TGAACTCGGT CGCGACGCGC TGGTTCGGCA CGCCGCTACC GCAGGGCTTC
ACGCTGCACT GGTACGCGAA GGCGTGGGAA GACTTCCAGC TCGCGAGCGT GCTGTGGGTG
ACGGTCGAGG TGGTCGGCGC GGTCGTGCTG CTGTCGGTCG CGCTCGGCGT GCCGGCCGCC
TATGCGCTCG CGCGCGTGCG GTTCCGCGGC AAGCGCTTCG CGCTGCTGGT GTTCCTGCTG
CCGCTGATGG TGCCGCCCGT CACCTACGGG ATTCCGATGG CGACCGTGAT GTACAAGGTC
GGGCTCGCCG GCACGCTGTC GGGCGTGATC CTCGCGAACC TCGTGCCGGC GCTGCCGTTC
GTGATCCTTG TGATGACGCC GTTCATCGAG CAGATCGACC CGAATCTCGA GGCCGCCGCG
CGCATCTTCG GCGCGAACAC GTGGCGCTAT TTCCGCTACG TACTGCTGCC GCTGCTGGTA
CCCGGCATGC TCGCGGCCGC GCTGCTCGTG CTGGTGCGCA CGATCGGGAT GTTCGAGCTG
ACGTTCTTCA CCGCCGGCCC GAGCACGCAG ACGCTCGTCG TCGCGCTGTA TTACGCGGTG
TTCTCGACCG GCGTGCGCGC GCCGCAGTCG ATCGACGCGA TGGCGATGAT CTACATGGCC
ATCACGCTGA TTTGGGTCGT GATCGCGCTG CAGTTCGTGA GCCCGACGCA GCTCGTCAGC
CGCGTGAAGC AGGAGCGACA GTAA
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| Protein sequence | MATDDHAAPT WPPKQGAPDA RPVNARTPQK MRSDLAGRAW KALVWGLMAF FLLNVMLLIA
TVAVNSVATR WFGTPLPQGF TLHWYAKAWE DFQLASVLWV TVEVVGAVVL LSVALGVPAA
YALARVRFRG KRFALLVFLL PLMVPPVTYG IPMATVMYKV GLAGTLSGVI LANLVPALPF
VILVMTPFIE QIDPNLEAAA RIFGANTWRY FRYVLLPLLV PGMLAAALLV LVRTIGMFEL
TFFTAGPSTQ TLVVALYYAV FSTGVRAPQS IDAMAMIYMA ITLIWVVIAL QFVSPTQLVS
RVKQERQ
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