Gene BamMC406_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1568 
Symbol 
ID6176978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1758363 
End bp1759433 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content72% 
IMG OID641681329 
Producthypothetical protein 
Protein accessionYP_001808271 
Protein GI172060619 
COG category[S] Function unknown 
COG ID[COG4861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.178264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGA ACGCCACCCT GTCGATAGCG GAACAGCACG TGCTCGACGA AGCCTGCGCC 
GCGTTCGAAC GCGCGACCCG ACGCTTCAAC GCACGGCCGG TGCGCGTGCC GGCCGCATCC
CGCGCGCATG CCGATGCGAT GATCCGCTTC GGCATTGGCG GGCAGACCTT CGAGATGCCG
GCCGCCGTGA GCGTTGGCGT CGAATCGGTA CAGGACGCCC GCGCGGCGCT GCTTCGCCGC
GGCGCCGCCC TGCTGCCCGG CGAGCGGCAG CTGATGCTTG TCGCACCGTA CGTGTCGGTC
GAGCTGGCCG CCCGCCTGAC CGATCAAGGC ATCCCGTTTC TCGATACCGC CGGCAACGCG
AGCCTGCTCG TGCCGGAGGC GACCGTGCTG ATCTCCGGCC GGCCGAAACC TGCGCGCACG
CCGCGCCGGC AGGCGTCGCG CGCGACGACG CCCAAGGGGC TCGCCGTGAT GTTCGCGCTC
GCGACGCAGC CGGGCCTCGT CGCGCAACCG TACCGGGCGA TCGCCGCCGC GTCCGGCGTC
GCGCTCGGCA CGGTCAACCT CGCGATGGAC GACCTGCTCG CGCGCGGCCT CGTCGCGCAG
CGGCGCAATG GCGAGCGCCT GATGCCCGAC TGGCCGCGCT TCGTGCAGGA ATGGGTCGCG
CTGTATCCGA GCCGGCTGCG CGCGAAACTG CCGGCCCGGC GGTTTGCCGC CGTCACGCCC
GACTGGTGGC GCGACTTCGA TTTCGCGGCA TTCGATGCGC GGCTCGGCGG TGAACCGGCG
GCCGACCTGC TGACGCACGA TCTGAAGCCA GCCGCGGTCA CCGTCTATAC GCACGGCGCC
GTGTCGAACC GCCTGCTGCT CCAGGCGCGC CTGCGCCCGG ACGAGCGCGG CGACGTCGAG
CTGCTCGAAG CGTTCTGGCC GCCGTCGCCG GCGCTCGACT GGCGCGAGCA GGACGTGCCG
CTCGTGCCGC CGCTGCTGAT CTACGCGGAT CTCGTCTCGT CCGGAGACAG CCGCAATCTT
GCCGCCGCCG AACACATCCA TGACCGATAC CTCGCCCACC CGCCCGCTTG A
 
Protein sequence
MPENATLSIA EQHVLDEACA AFERATRRFN ARPVRVPAAS RAHADAMIRF GIGGQTFEMP 
AAVSVGVESV QDARAALLRR GAALLPGERQ LMLVAPYVSV ELAARLTDQG IPFLDTAGNA
SLLVPEATVL ISGRPKPART PRRQASRATT PKGLAVMFAL ATQPGLVAQP YRAIAAASGV
ALGTVNLAMD DLLARGLVAQ RRNGERLMPD WPRFVQEWVA LYPSRLRAKL PARRFAAVTP
DWWRDFDFAA FDARLGGEPA ADLLTHDLKP AAVTVYTHGA VSNRLLLQAR LRPDERGDVE
LLEAFWPPSP ALDWREQDVP LVPPLLIYAD LVSSGDSRNL AAAEHIHDRY LAHPPA