| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1543 |
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| Symbol | |
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| ID | 6176321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1714102 |
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| End bp | 1715289 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641681304 |
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| Product | periplasmic multidrug efflux lipoprotein precursor |
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| Protein accession | YP_001808246 |
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| Protein GI | 172060594 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.518401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACA AACGCTCCCT CGCGCGCCGC CTCCAGCTGG CGCCCGTCGC GTTCGCGGCC
ATGCTGGCCG TGGCCGGATG CGGAAAGGGC GACAACGACA AGGCGCCGGA GGCCATTCAG
AACGCGACGG TCGTGACGGT GCGTCCGACG GCCGTGCCGA TGACCGTCGA ATTGCCGGGC
CGGCTCGACG CGTATCGGCA AGCGCCGGTG CGCGCACGGG TCGCGGGCAT CGTCACCGCG
CGGACTTACG AGGAAGGCCA GGAAGTGAAG CAGGGCGCGG TGCTGTTCCG CATCGATCCC
GCGCCGCTGA AGGCCGCGCG CGATGCCGCG CAGGGTGCGC TCGCGAAGGC GCAGGCCGCC
GCGCTCGCGG CGAGCGACAA GCGCCGCCGT TACGACGACC TGGTGCGCGA CCGCGCGGTC
AGCGAGCGCG ATCACACCGA GGCTCTCGCC GACGACACGA GGGCTAAGGC CGACGTCGCG
TCCGCGAAGG CCGAGCTCGC ACGCGCGCAG TTGCAGCTCG ACTATGCGAC CGTCACCGCG
CCGATTGCGG GCCGCGCACG ACGCGCGCTC GTCACCGAAG GCGCGCTCGT CGGCCAGGAC
CAGGCCACGC CGCTCACGAC CGTCGAGCAG CTCGATCCGA TCTACGTGAA TTTCTCGCAG
CCGGCGGCCG ACGTCGACGC GTTGCGTCGC GCGGTGAAGA GCGGGCACGC GACGGGGATC
GCGCAGCACG ACGTCACGGT GACGCTGCGG CGCGCCGACG GCACCGCGTA TCCGCTGAAG
GGCAAGCTGC TGTTCAGCGA TCTCGCGGTC GATCCGACCA CCGATACCGT CGCGATGCGC
GCGCTGTTCC CCAACCCCGA GCGCGAGCTG CTGCCCGGCG CGTATGTGCG GATCGCGCTC
GATGCGGCCG TCGACCAGCG GGCGATCCTC GTGCCGCGCG ATGCGCTGCT GCGCACCGCC
GAGCGCACGT CGGTGCGCGT GGTCGGCACG AACGGCAAGG TGAAGGACGT CGAGGTCGTC
GCCGACCAGA TGAGCGGACG CGACTGGCGC ATCACGCGCG GCCTGTCGGG CGGCGAGCGC
GTGATCGTCG ACAACGCCGC GCAGTTCGCG CCCGATACCG CCGTCAAGCC CGTCGAGCAG
GCATCGCCGA CGAAGGCCGC GTCAGCCGCG GCCGCCCGTC AAACCTGA
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| Protein sequence | MNNKRSLARR LQLAPVAFAA MLAVAGCGKG DNDKAPEAIQ NATVVTVRPT AVPMTVELPG
RLDAYRQAPV RARVAGIVTA RTYEEGQEVK QGAVLFRIDP APLKAARDAA QGALAKAQAA
ALAASDKRRR YDDLVRDRAV SERDHTEALA DDTRAKADVA SAKAELARAQ LQLDYATVTA
PIAGRARRAL VTEGALVGQD QATPLTTVEQ LDPIYVNFSQ PAADVDALRR AVKSGHATGI
AQHDVTVTLR RADGTAYPLK GKLLFSDLAV DPTTDTVAMR ALFPNPEREL LPGAYVRIAL
DAAVDQRAIL VPRDALLRTA ERTSVRVVGT NGKVKDVEVV ADQMSGRDWR ITRGLSGGER
VIVDNAAQFA PDTAVKPVEQ ASPTKAASAA AARQT
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