| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1534 |
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| Symbol | |
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| ID | 6177631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1701191 |
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| End bp | 1703833 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681295 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001808237 |
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| Protein GI | 172060585 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.155889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.781332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGCGT CGGTCGCGGT GACGTCGGGT ACGAACGCCG TCGCGGATAC GGTCGACACG
GTCGCGCGGG AAGATGCGCG CCGCGCGGCC GCAAGCGCAT CGCCGGCTGC ACCGGCGGCC
GGCGAGCCGC ACTTCGACGA TTCGATGCTG ATGCATGGCC CGGACAGCGA GCCGATCGAT
ACGACACCGT TCGAGCGTCC GAATGCCGTC GCGCCGGGTG TGCATCGTGC GGACCTGATC
GTCAACGGGC AGTGGCGCGG CGTGGAAGAC ATCACGTTCC GTCGCGACGC GCGTGGCGAC
GTACTGCCGT GCTACGACCG GACGCTGCTG CAGCGGGCCG GCGTCGACCT CGACCGAAGC
GCGCGGGGTC AGGACGGCAG CCAGCCGCCG AATCCGATGC CCGACGGGCC GATTTGCGAT
GCGCCGTCCC GGTATGTGCC CGGCGCCGCG CTGTCGTTCG ATGCGGCCGA GCAGAAGCTG
TATCTGACGG TACCGCAGTT CTACATGCGG CTCGCCAGCC AGAGTACCTA CGTCGATCCG
GCAAACTGGA CGAACGGCGT GCCGGCCGCG TGGCTGAACT ACAACGCCAG CGTGTTCACG
ACGCGTTCCA GCGGCTACGA ATTCTCGCAG CTCTACACGG GCCTCTCGAT GGCCGCGAGC
GCCGGGCGGT TCCGGATTCG CCACAACGGC AACCTCACCT GGTCGCAGCG CGGCGGCGCC
CGCTATCAGC GCGGCTACGT CTACGCGCAA ACCGATCTGC CCGACTGGCG CGCGCAACTG
CTCGCCGGCG AAAGCTCGAC GAGCGGCGCG CTGTTCGACG CCGTGTCGTT TCGCGGCGTG
CAGCTCGCGA GCGACGACCG GATGCTGCCC GACGAGCAGC GCTACTACGC GCCGGTCGTG
CGCGGTGTCG CGCAATCGAA TGCCAAGGTA TCGATCTACC AGCGCGGCTA TCTCGTTCAC
GAGACGACCG TCGCACCGGG ACCGTTCGCG ATCGACAACC TGCAGGCGAT GAGCTACGGC
GGCGACCTGA ACGTGACGGT GACGGAGGCC AACGGCGAAA CACGCAGCTT CGTGGTTCCG
TTCGCGACGA CGGTCCAGCT GCTGCGTCCA GGCAGCACAC GGTTCAGCGC GATGGCGGGG
CAGGCGATCG AACTCGGCGG TGACATCGGC ACGCAGTACG TCGGCCAGTT CACCGTGCAG
CGTGGCGTCA GCAACGCGGT GACGGCCTAC GGCGGCGCCG CGTTCGCGAA CCGCTACCAG
TCGATGCTGA TGGGTGTCGC GCTCAATACG TCGATCGGCG GCTTCGCGGC GGACGTCACG
ATCGCGCGGA CCCAGCCGCG AGGCAGCGAG CGTCTGACCG GCTCGAGTAT CCGCGTGTCG
TACAGCAAGA ACCTGCCGAA CAGCGGCACG AACTTTTCGC TGCTCGCGTA TCGCTACTCG
ACGAAAGGCT ATCTCGGCCT GCGCGACGCG TTGCTGCTGA ACGGCCAGAG CGACCAGGGC
GCGGGCGCCG CGTCGTTTTC GCGGCTGCGC AATCGGGTCG ATCTCAACGT GAGTCAGCAG
ATCGGGCGGT CGGGCAACCT CTATGCGAAC GGATCGGCGC TCAGCTACTG GGCGGGAGGC
GGACAGTCGC TCAGCTTCAC GCTCGGCTAC AGCACGCAGT GGCGCGACGC CACGGTGACC
GCGTCGGTAC AGCGCGTGCG CAACCTGTCC GCGCGGGAGC CGTCGTTCGG CGGCGGGGCG
GGCAGCACGC TCGCGAGCCT GAACGTATCG ATTCCGCTGG GGCGCAACGC GCGGCGCGCA
CCGATCTTCA GCACGCTGAT GACGCACGAC AGCAGCGCCG GTACGAGCGC CACGGCGAGC
CTGGCGGGCC GATTCGGCGA GCAGAACGAC GGATCGTACT CGTTGTCGTC GAGCTACGAC
GGCAACAACC GGGCGTCGTC AGGCAGTTTC GGCGTCGGCT ATCAGCGGCC GGCCGTGTCG
CTGTCGGCGA ATCTCGGCAT CGGGCGCGAC TACCAGCAGG CGTCGGCGAG CGCGACGGGC
GGCCTGGTGC TGCACCCGGG CGGCCTGACG CCGGCCCCCA CGTTGAGCGA GACCATCGGT
GTCGTGCACG CGCCAAACGC GCGCGGCGCA CTGGTTGCGA ACACGAGTGC ACGCGTCGAC
CGCTTCGGTT ACGCGATCGT GCCGAGCCTC ATTCCGTATC AGCTCAACAA GATCGACATC
GATCCGAAGG ACGTCCCCGA GGACGTCGAA CTGAAGACCG TGTCGCACAG CGTTGCGCCG
CGCTCGGGTT CGATCGTCAT GCTGTCGTAC GACACGCTGA AGGCGCGTGC GCTGCTGATC
GACGCGCAGA TCGACGACGG CCGGCCGCTG CCGTTCGCCG CGCGCGCGTT CGACGCGCGC
ACCGATGCTG CGCTCGGCGT GGTCGGGCAG GGCAGCCGCC TGTTCGTGCG CAGTGCCGAA
CACGACGGCC GAATTCGCGT CGAGTGGGGC ACGCGCGCGG ATCAGCAGTG CGTGATCGAT
TACGCGGTGC CGGCTGCGCA GCGTTCGGGA AGTGGCTACG TGACGCTGGA GGGCATCTGC
CGCGCGGCGA CGGTGATGCC GAGGGCGGCC GTACCGTCGA CCGGCGGTAT CGAGGAGCGC
TAA
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| Protein sequence | MFASVAVTSG TNAVADTVDT VAREDARRAA ASASPAAPAA GEPHFDDSML MHGPDSEPID
TTPFERPNAV APGVHRADLI VNGQWRGVED ITFRRDARGD VLPCYDRTLL QRAGVDLDRS
ARGQDGSQPP NPMPDGPICD APSRYVPGAA LSFDAAEQKL YLTVPQFYMR LASQSTYVDP
ANWTNGVPAA WLNYNASVFT TRSSGYEFSQ LYTGLSMAAS AGRFRIRHNG NLTWSQRGGA
RYQRGYVYAQ TDLPDWRAQL LAGESSTSGA LFDAVSFRGV QLASDDRMLP DEQRYYAPVV
RGVAQSNAKV SIYQRGYLVH ETTVAPGPFA IDNLQAMSYG GDLNVTVTEA NGETRSFVVP
FATTVQLLRP GSTRFSAMAG QAIELGGDIG TQYVGQFTVQ RGVSNAVTAY GGAAFANRYQ
SMLMGVALNT SIGGFAADVT IARTQPRGSE RLTGSSIRVS YSKNLPNSGT NFSLLAYRYS
TKGYLGLRDA LLLNGQSDQG AGAASFSRLR NRVDLNVSQQ IGRSGNLYAN GSALSYWAGG
GQSLSFTLGY STQWRDATVT ASVQRVRNLS AREPSFGGGA GSTLASLNVS IPLGRNARRA
PIFSTLMTHD SSAGTSATAS LAGRFGEQND GSYSLSSSYD GNNRASSGSF GVGYQRPAVS
LSANLGIGRD YQQASASATG GLVLHPGGLT PAPTLSETIG VVHAPNARGA LVANTSARVD
RFGYAIVPSL IPYQLNKIDI DPKDVPEDVE LKTVSHSVAP RSGSIVMLSY DTLKARALLI
DAQIDDGRPL PFAARAFDAR TDAALGVVGQ GSRLFVRSAE HDGRIRVEWG TRADQQCVID
YAVPAAQRSG SGYVTLEGIC RAATVMPRAA VPSTGGIEER
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