| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1464 |
|---|
| Symbol | |
|---|
| ID | 6178627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1628625 |
|---|
| End bp | 1629662 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641681221 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001808168 |
|---|
| Protein GI | 172060516 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4158] Predicted ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.987014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACC CGACCAAGCA GCGGAACCTC GCTTCCGCGA CGGCCCATCC GGTGGCCACC
CGTACGCCGC TGATGCGCGG CGCCGATCAT CGCGCACGCA TGCAGTCGCT GATGCGCACC
GCCGGCATGC TGCCGGTGCT GCTGGTCCTC TGCATCGGCT TCGGGTTCCT GACCGACGGC
TTCTTCACGC TGCAGAACCT GTCGATCGTC ACGCAGCAGG CATCGATCAA CATCGTGCTC
GCGGCCGGCA TGACCTTCGT GATCCTGACG GGCGGCATCG ACCTGTCGGT CGGCTCGGTA
CTCGCCGCAT CGGCCGTCGC CGCGCTGCTC GCGTCGACCA TCCCCGGCTG GGGCTGGCTC
GGCGTGCCGA TCGCGCTCGC CGTCGGCCTC GCGTTCGGCG TGATCAACGG CGGCCTGATC
TCGTTCCTGC GCCTGCCGCC GTTCATCGTC ACGCTCGGCG CGATGACGGC CGTGCGCGGG
GTCGCCCGCC TGATCGGCAA CGACACGACC CTCTTCAACC CGCAACTGCC GTTCGCGTTC
ATCGGCAATG GCACGATCCT CGGCGTGCCG TGGCTCGTCG TGATCGCCTG CGCGGTGATC
GCATTGTCGT GGTTCATCCT GCGGCGCACG GTGCTCGGGA TGCGGATCTA TTCGGTCGGC
GGCAATCCGG AAGCCGCGCG GCTGTCCGGC ATCAACGTGC GGGCGATCCA GCTGTTCGTC
TATGCGGCGT CGGGCCTGCT CGCCGGTCTC GGCGCGGTGA TGTCGTCGGC GCGGCTCTAT
GCGGCCAACG GCCTGCAGCT CGGCCAGTCG TACGAACTCG ACGCGATTGC CGCGGTGATC
CTCGGCGGCA CGAGCTTCGT CGGCGGCGTC GGCTCGATCG TCGGCACGCT GATCGGCGCG
CTGATCATCG CGGTACTGAC CAACGGCCTC GTGCTGCTCG GCGTGTCGGA CATCTGGCAG
TACATCATCA AGGGGCTCGT GATCATCGGC GCGGTCGCGC TCGACCGATA TCGCCAGCGC
GACTCGGCCC GCACCTGA
|
|---|
| Protein sequence | MINPTKQRNL ASATAHPVAT RTPLMRGADH RARMQSLMRT AGMLPVLLVL CIGFGFLTDG
FFTLQNLSIV TQQASINIVL AAGMTFVILT GGIDLSVGSV LAASAVAALL ASTIPGWGWL
GVPIALAVGL AFGVINGGLI SFLRLPPFIV TLGAMTAVRG VARLIGNDTT LFNPQLPFAF
IGNGTILGVP WLVVIACAVI ALSWFILRRT VLGMRIYSVG GNPEAARLSG INVRAIQLFV
YAASGLLAGL GAVMSSARLY AANGLQLGQS YELDAIAAVI LGGTSFVGGV GSIVGTLIGA
LIIAVLTNGL VLLGVSDIWQ YIIKGLVIIG AVALDRYRQR DSART
|
|---|
| |