Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1434 |
Symbol | |
ID | 6176960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1596407 |
End bp | 1596817 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641681191 |
Product | hypothetical protein |
Protein accession | YP_001808138 |
Protein GI | 172060486 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00387753 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0246951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGT ATCGCGATCT GACCGACCAC CAGTGGCACT GCGTCGTGCC GCTTCTGCCT GAAATGCAGC CGCGCACCGA GTTGCGCGGC CGGCCGCTGG CCAACACGCG CGCCGTCCTG AACGGCGTTC TATGGGTTAT CTATAGCGGC GCGACCTGGT CCGCGATGCC GCGTCGTTAC CCTTCATACC AGACATGCCA TCGCCGCTTC AAGGTCTGGC ACGAGACCGG CACGTTGATG CAGGTGATGC GCGAGCTGTA TGGCGACGCA GGCGTGAATC TGTGCAACGA ACTGTCCACG CGCATGCGCA AGCACACGCA ATCGAAGGCG GCAGAGGCGC GGGGTGCCGC GGCGCCGGTG TATCGTGCAC CGGGCAGCTA TGCGTCGGAT ACGCTGAAGC ACGCAGCGTG A
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Protein sequence | MTPYRDLTDH QWHCVVPLLP EMQPRTELRG RPLANTRAVL NGVLWVIYSG ATWSAMPRRY PSYQTCHRRF KVWHETGTLM QVMRELYGDA GVNLCNELST RMRKHTQSKA AEARGAAAPV YRAPGSYASD TLKHAA
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