| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1328 |
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| Symbol | |
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| ID | 6177716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1472844 |
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| End bp | 1474490 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641681083 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001808032 |
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| Protein GI | 172060380 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATAC TTGTTGTTTT CAGAATTGTT TTGGTTGCCA TATCTCTGAT TGCGGTCAAT
GCGCAGGCAG AGACGTCAAC TCCATCGAAA ATCAAGCCTA CTGCTGCCAT GTCAGATCTC
CCGCGCTACG AAAAACTGCC GCTGTTCGAT CCACATCGAA AGAGTTTCAC ATGTACTTAT
CAAGCACAGC ATGTGCCGCC GGTCGATCCG CAGGCGGAGT TGTGGTTTCA GCAAGCGCTT
GCGCTAGATG ATCCCGAGCT GTATTACCAG AAGCGTGACT ATGCGAAGAT CTATCAGTTA
TACGTTCAGG CGGCTGAACG CGGGCATTGG AAAGCCATGC TCAATGTTGC CTCGCTGATC
CGGAGCAGCT ACCCCGGCGT GCCTCAGCAC GATCCCGAGG TTGCAATTGA ATGGATCGAA
AAGGCAATGA AGCTGGGGGT GCCGGATGCC TACGACATGA TGGGTGTCTA TCACCAGAAC
GGCTTGATCA AAGGAGGCGA TGCGACCACC GCCTATGCTT TCTTCCAGCG CGCGGCAGAC
ATGGGCAGTC CATCGGCGAT GGCGTTTCTC GGCGAAAAGC TCGACGCAAC GTATGACGAT
TCTGATGGAG AGTTTTGGGG AAATTTGCCG ATTGCTACCC AGATGCTCGA GTGCGCTGTT
GCGCAAGGTT ACGGCGATGC CGCTGAAGAG TTGTCTTTTG TCTATGCTCG CCCAAGAACG
GCGGAGGCAA AACGGCGTGC GCTGATGATG CTTCAAGAAG GGGTAAAGCT GGGAAGTGCG
AAATGTGCAA CAAAGCTGTC GATTGAATTT GACGGGTTCA ATCTGACTAA TGGTCGAAAT
CTTCCCGGTA GCATCGACAA AGCGCGCGCT GACAGATACC GCGTACTAAA GGATGCATTA
GAGCATTATC AGGGGCGTAT AAAGCTCCCT AATCTGAATA AGGTCCTGCC GCTGCCGCCA
GCATCGCTTC CCAAGTGGGA CGGGAATGCG AAAACGTTGC TCGATGCTGC GAAGGCCGTT
ACACCATCAC CCAAGCCGCA AAAGACAGCG GCGCTTGATG GCCGAGCATT TATCCCGGAT
GGATATGCCG TTGCTCGATT GGAAGACAGT GATGGGCTTG TCGTCCCCGG CGACCAACCT
GTACCAAAAA AAGGCTACTG GCTGGCGTTG TACGGTTCGT CGGTTGAGCC TGCTGCTCGA
TTGGCAGCGC GTGCTGGAAA TCCGGAGCAC TTCGAGGCCG GGGAGCGATT CGAACTCCCA
ACCCATGGCT GGTTGTCGTC GGATCGCGTG CAGTGGCATT ATCTTGGCGA GGCTGTCAAA
TTGCCGCCGC AACGAGCTGA CTTCATCGCT CGTCTTGTCG GCGCTGGAAT GATGCGGGAA
ATTCCCGGCC AGCCGTCGCG AGTGCGATGT GCTGGAGATC GATCGTGCCC GGAAACCGGC
ATATGGGAAG CCCGCGTTGC AGAAGCTCAC CCTATGGCCA GTCTCTATAA CCGCTGGGAT
CAACAAGCTT TCATCGAGCA GGGAAGCCCT TTCCCTGCCC CGGGTGACCG CTTTATCGAC
ATTGCGATGG AAGAGATCCA GTGGACGTAT CTTGGTAGCC CGAACGACGA AACCGGGATA
CCAGGCATTC GTACGATCAG CGTGTAG
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| Protein sequence | MPILVVFRIV LVAISLIAVN AQAETSTPSK IKPTAAMSDL PRYEKLPLFD PHRKSFTCTY
QAQHVPPVDP QAELWFQQAL ALDDPELYYQ KRDYAKIYQL YVQAAERGHW KAMLNVASLI
RSSYPGVPQH DPEVAIEWIE KAMKLGVPDA YDMMGVYHQN GLIKGGDATT AYAFFQRAAD
MGSPSAMAFL GEKLDATYDD SDGEFWGNLP IATQMLECAV AQGYGDAAEE LSFVYARPRT
AEAKRRALMM LQEGVKLGSA KCATKLSIEF DGFNLTNGRN LPGSIDKARA DRYRVLKDAL
EHYQGRIKLP NLNKVLPLPP ASLPKWDGNA KTLLDAAKAV TPSPKPQKTA ALDGRAFIPD
GYAVARLEDS DGLVVPGDQP VPKKGYWLAL YGSSVEPAAR LAARAGNPEH FEAGERFELP
THGWLSSDRV QWHYLGEAVK LPPQRADFIA RLVGAGMMRE IPGQPSRVRC AGDRSCPETG
IWEARVAEAH PMASLYNRWD QQAFIEQGSP FPAPGDRFID IAMEEIQWTY LGSPNDETGI
PGIRTISV
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