Gene BamMC406_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1309 
Symbol 
ID6176466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1451122 
End bp1452036 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content67% 
IMG OID641681066 
Producthypothetical protein 
Protein accessionYP_001808015 
Protein GI172060363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.660955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.351761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TTCGTTCCGC GCTGCTGGCG CTGACGATTG CTTGCGGTCT CGTCGCCGCG 
CCCGCCGCGT TCGCGAAACC GCCGGTGCCG CCCGCGGTCA CGCCGACGCT GGCCGTCGGT
CCGCAGTACG ACACCACGCA CGTCTGCGTC GCGCCGGAAG ATTTCGACCG CTTTACCGAC
AGCTTCGTCG CGACGTTCGG CGGCAAGAAG TCGAAGCAGG GCGTGTTCCA GGTCACGCCG
ACGCCGAGCC AGACGATGTC GCAGCTCGTG CTCACGCCGG TCGGCACGGT GTCGGTGTTC
GGCTTCAAGA CGCCGATCCC GTATCCGTTC TGCGAGGAGC GCACCGGTTA TCTCGTCACC
GACATGGACG TCGCGGTGAA GTCGGCGCGT GAGCACGGCG CGGACGTGAT CGTCGACACG
TTCCCGGACC CGATCGGCCG CGATGCGATC ATCGCGTGGA CGGGCGGCGT GAAGATGCAG
CTCTACTGGC ATACCCAGGC GCCGCACTAC GACGCGTTGC AGACCATCCC CGAGAATCGC
GTCTACGTGT CGCCGCAAAG CGTGCGCAAG TTCGTGCACG ACTTCGTCAA GTTCTCGAAG
GGCAAGGTGG TGTCCGACAA CCTGAAGGCG CCGGGCGTCG AGATCGGTCG CCCGAACGAC
ACGTACCGCC GCATCCGCAT CGAATCGGGC TTCGGCAAGA TGACCGTGCT CGTGACGGAT
GGCAGCCTGC CGTACCCGTT CGGGCGCGAG ATGACCGGCT ACGAAGTGCC CGATCTCGGC
GCGACGCTGA AACGGGCCGA AGCCGCCGGC GTGACCGTGC TCGTGCCGAC GTTTACCGCC
GACGGCCGCG ACGCGGCGCT CGTGCAGTTC CCGGGCGGCT ACGTCGCCGA GATCCACGCG
AGCGCGGCGC GATGA
 
Protein sequence
MKTLRSALLA LTIACGLVAA PAAFAKPPVP PAVTPTLAVG PQYDTTHVCV APEDFDRFTD 
SFVATFGGKK SKQGVFQVTP TPSQTMSQLV LTPVGTVSVF GFKTPIPYPF CEERTGYLVT
DMDVAVKSAR EHGADVIVDT FPDPIGRDAI IAWTGGVKMQ LYWHTQAPHY DALQTIPENR
VYVSPQSVRK FVHDFVKFSK GKVVSDNLKA PGVEIGRPND TYRRIRIESG FGKMTVLVTD
GSLPYPFGRE MTGYEVPDLG ATLKRAEAAG VTVLVPTFTA DGRDAALVQF PGGYVAEIHA
SAAR