Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1207 |
Symbol | |
ID | 6177944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1334556 |
End bp | 1335734 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641680963 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001807914 |
Protein GI | 172060262 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGC CTACCATCAA GCATGTGCGT GCGTTCACCG TTCGCGGCGG CGGCGCGGAT TATCACGATC AGGACGACGG ACACTGGATC GACGACCACA TCGCTACGCC GATGTCGCGT TACCCGGAAT ACCGAGAAAG CCGACGGTCG TTCGGCATCA ACGTCCTCGG TACGCTCGTG GTCGAGATCG AAGCGAGCGA CGGCAGCGTG GGCTTCGCGG TCACGACGGG CGGCGAAATC GGTGCGTTCA TCGTCGAAAG ACATCTGGCG CGTTTCCTCG AGGGCCGGTG CGTGACCGAC ATCGAGACGA TGTGGGACCA GATGTATTAC GCGACGCTCT ACTATGGGCG CAAGGGGGTC GTGCTCAACA CGATCTCCGG CGTCGATCTC GCCCTGTGGG ATCTGCTCGG CAAGGTGCGT GGCGAACCCG TCTATCAGTT GCTCGGCGGC CCGGTTCGCG ACGAGCTGGT GTTCTATGCC ACCGGCGCTC GCCCGGATCT CGCGAAGCAG ATGGGCTTCA TCGGTGGCAA GCTGCCGTTG CAGCACGGTC CGGCCGAGAA CGAGGAAGGG CTCCGGAAGA ACCTGGAGAA ACTCGCCGAC ATGCGCAACC GCGTCGGTGA CGACTTCTGG CTTATGTTCG ATTGCTGGAT GAGCCTCGAC GTGCGCTATG CGACGCGCCT TGCCAACGCC GCCCATGAAT ACGGTCTGAA GTGGATCGAA GAATGCCTGC CGCCTGACGA TTACTGGGGC TATGCGGATC TGCGGCGCAA CGTGCCGCGC GGCATGATGG TGTCGACGGG CGAGCATGAG GCGACCCGAT GGGGCTTCCG CATGCTGCTC GAAATGGGAT GTTGCGACCT GATCCAGCCG GACGTCGGCT GGTGCGGCGG GATCACCGAG CTCATCAAGA TTTCGGCGCT GGCGGACGCG CACAACGTGA TGGTGGTGCC GCACGGTTCA TCGGTGTACA GCTACCATTT CGTCGTGACG CGCCACAATT CGCCGTTCGC GGAGTTCCTG ATGATGGCAC CGAAGGCGGA CGAAGTCGTA CCGATGTTCA CGCCGCTGTT GCTTGACGAA CCGGTTCCGG TCAACGGGCG GATGAAGGTG CCGGACCGGC CGGGATTCGG TGTGCGGCTC AATCCGGAGT GCGCGCTGGT TCGTCCGTAC ACGCATTGA
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Protein sequence | MAMPTIKHVR AFTVRGGGAD YHDQDDGHWI DDHIATPMSR YPEYRESRRS FGINVLGTLV VEIEASDGSV GFAVTTGGEI GAFIVERHLA RFLEGRCVTD IETMWDQMYY ATLYYGRKGV VLNTISGVDL ALWDLLGKVR GEPVYQLLGG PVRDELVFYA TGARPDLAKQ MGFIGGKLPL QHGPAENEEG LRKNLEKLAD MRNRVGDDFW LMFDCWMSLD VRYATRLANA AHEYGLKWIE ECLPPDDYWG YADLRRNVPR GMMVSTGEHE ATRWGFRMLL EMGCCDLIQP DVGWCGGITE LIKISALADA HNVMVVPHGS SVYSYHFVVT RHNSPFAEFL MMAPKADEVV PMFTPLLLDE PVPVNGRMKV PDRPGFGVRL NPECALVRPY TH
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